Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0906 ATGGCAGAAGGTTTAGAATCAACGGGAGTTGTATCAGTGAGGGGTAGATCGTGGAAAGCTCATATGGGCATGACACTGTCGCAGGCATTCTATGGTGGCTACCATGTAATCACAAAAGTGGCCCTTAATGTTGGGGTCAACCAACTAGTTTTCTGCTTCTACAGGGATCTCCTTGCCTTCACTATTCTTGCTCCTCTCGCTTTTTTTCTTGAAAGACGAAGTAGACCACCCCTTACCAAGAAGCTATTGATGTCCTTCTTCATTCTTGGATTGACCGGGGTATTTGGCAACCAGCTTTTGTTTCTTATTGGTTTAAGTTATACTAATCCAACTTATGCTGCTGCTGTACAGCCAACCATTCCAGTTTTCACATTTTTGTTTACTTTGATGATGGGCATAGAAAAACTGAACTTGCTCAGATATGAAGGTTGGGCAAAGGCTGGAGGAACTCTTATCTGTGTTTCAGGAGCCATATTTATGGTTTTCTATCGTGGTCCAGCTGTGATAGGGGGTAACGAAATGGATCAAGTTGCACAAATTAAACCAAGTGGCAGAGGCCAGGCAGAGACTTCAGCATGGTTATTCAACAGTTATCTTGATATTGGATTAGATAACTTTCAGCTTGGGGTTGTGTTCTTGATAGGGAACTGCATCTGCATGGCTGCTTATCTAGCCCTTCAGGCACGATTGTTGAAAAAATATCCTGCAAATCTATCTGTCACAGCATATTCATTCTCCTTTGGAGTTGCACTGTTGGTGATCGCATCATTTTTCATGGTTAACGACTCAACTGACTGGATTTTGACACAATCAGAGATACTGGCTGTTGCATATGCTGGAACTATTGCATCTGCTCTTAACTATGGAATCATTTCATGGAGCACTAAGATCTTGGGGCCAGCTTTGGTTTCCCTTTACAATCCTCTTCAACCTGCATTTTCTGCCTTCCTTTCACAAATTTTCCTTGGCACTCCAATTTACCTGGGAAGCATCCTAGGGGGATCTTTCATCGTTGCTGGTCTATATTTAGTTACTTGGGCATCTTATAGAGAAAGACAAGAAACTTATGGAGTTACTCCTAATGGCTCTTGGATCTCTGAGCCACTTCTTCATGAAAAAAGTGAATACCAGAGTGGTCACACTCAGGCTCCTCCAGCGTAA 1161 0.4264 MAEGLESTGVVSVRGRSWKAHMGMTLSQAFYGGYHVITKVALNVGVNQLVFCFYRDLLAFTILAPLAFFLERRSRPPLTKKLLMSFFILGLTGVFGNQLLFLIGLSYTNPTYAAAVQPTIPVFTFLFTLMMGIEKLNLLRYEGWAKAGGTLICVSGAIFMVFYRGPAVIGGNEMDQVAQIKPSGRGQAETSAWLFNSYLDIGLDNFQLGVVFLIGNCICMAAYLALQARLLKKYPANLSVTAYSFSFGVALLVIASFFMVNDSTDWILTQSEILAVAYAGTIASALNYGIISWSTKILGPALVSLYNPLQPAFSAFLSQIFLGTPIYLGSILGGSFIVAGLYLVTWASYRERQETYGVTPNGSWISEPLLHEKSEYQSGHTQAPPA* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0906 386 PANTHER WAT1-RELATED PROTEIN 20 382 IPR030184 GO:0016021|GO:0022857
Vra11g0906 386 PANTHER NODULIN MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN 20 382 - -
Vra11g0906 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 350 - -
Vra11g0906 386 Pfam EamA-like transporter family 208 345 IPR000620 GO:0016020|GO:0016021
Vra11g0906 386 Pfam EamA-like transporter family 24 143 IPR000620 GO:0016020|GO:0016021
Vra11g0906 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0906 Vra-Chr11 7758528 7762468 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0906 103 373 Nodulin-like Gene Family AT5G45370 58.182 1.85e-112 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0906 - - gmx:100793730 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0906 11 7758528 7762468 Vra11g0906 11 7758528 7762468 ECH