Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0905 ATGGCGACTGTTGGAGTTGGAGCGGGTGTGGGGGGTGATATATGGAAGTCCCATGTGTCCATGGCGATGGTGCAGCTTTTCAATGGTGGCTACCATGTCATCACCAAAGTGGCCCTTAATGTTGGTATCAACCAGTTAGTCTTCTGCGTATTCCGCGATCTCATTGCCCTTTCCATCCTCGCACCCTTTGCTTATTTCCGTGAAAAACAGATTCGACCACCCACTACTAAGAATCTACTGGTGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCAGCTTTTGTTTCTTATTGGTTTAAGCTATACTAATCCAACTTATGCGGCTGCCATACAACCGTCTATTCCAGTCTTTACCTTTATATTGGCTGTGATGATGGGTACAGAAAGAGTGAACTTAGTCAGATATGATGGTCTGGCTAAAGTTGGAGGAACCATCATTTGTGTTTCTGGTGCTGTAGTGATGGTTTTGTATCGTGGTCCAGCTTTGATAGGATATGCGGATATCAATCTCGCTATACAAAATGAAATAAGTGCCAAAGGTCAGCCAGAGCCATCTGGATGGCTAATTGGTAGTTTCCAGGACTTCGGGTTAGACCATTTTCATCTTGGGGTTCTGTGCTTGATAGGGAACTGCATTTGTATGGCTGCGTTTCTAGCCATTCAGGCACCTGTTTTAAAAAAATATCCTGCAAACATATCGGTCACAGCATTTTCATACTCCTTCGGTGCTTTACTGATGGTTATAGTGTCCTTATTCATGAATTATGAGGCAACTGACTGGACTTTGACATCATCAGAAATCCTTGCTGTTATGTATGCTGGAACTATTGCATCTGCCCTTAACTATGGACTCATTACATGGTGTAACAAAATCTTGGGGCCAGCCATGGTTTCCCTTTACAATCCGCTTCAACCTGCGTTTTCAGCCATCCTCTCCCAAATTTTCCTTGGAAGTCCAATTTACTTGGGAAGAATTGCACTCCAGAAAGGCCGCGCTTTCTCTGGGTCCTCCTCTGTTTCCTCCAAAACCTTATCAGCTTAA 1050 0.4381 MATVGVGAGVGGDIWKSHVSMAMVQLFNGGYHVITKVALNVGINQLVFCVFRDLIALSILAPFAYFREKQIRPPTTKNLLVSFFFLGLTGIFGNQLLFLIGLSYTNPTYAAAIQPSIPVFTFILAVMMGTERVNLVRYDGLAKVGGTIICVSGAVVMVLYRGPALIGYADINLAIQNEISAKGQPEPSGWLIGSFQDFGLDHFHLGVLCLIGNCICMAAFLAIQAPVLKKYPANISVTAFSYSFGALLMVIVSLFMNYEATDWTLTSSEILAVMYAGTIASALNYGLITWCNKILGPAMVSLYNPLQPAFSAILSQIFLGSPIYLGRIALQKGRAFSGSSSVSSKTLSA* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0905 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 328 - -
Vra11g0905 349 PANTHER WAT1-RELATED PROTEIN 14 328 - -
Vra11g0905 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 159 - -
Vra11g0905 349 Pfam EamA-like transporter family 21 157 IPR000620 GO:0016020|GO:0016021
Vra11g0905 349 Pfam EamA-like transporter family 205 327 IPR000620 GO:0016020|GO:0016021
Vra11g0905 349 PANTHER WAT1-RELATED PROTEIN 14 328 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0905 Vra-Chr11 7752289 7756804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0905 10 276 Nodulin-like Gene Family AT3G45870 67.790 9.14e-120 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0905 - - gmx:100787738 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0905 11 7752289 7756804 Vra7g0304 7 4727311 4750892 PCT