Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0904 ATGGTCTTTACTAGAATTGCTTCACTTGTCTCCACCAAATTCCCCAATTCAAACTCCTCCACTTCTCTATCCAACAACATTCGAATCTCTTCCTCTCTCCAGGACCTCTCCTCGTACCGTCATGTTGACGCCACGGTACCCCTTCACAAGCTTCCAACACCCTCCACTTCCTCGCGCCGCAGATGCCTCAAAATCGCACTCTTCCTCGCATCGTTCTTCCTCCTAACCTACCTCCTCTTCTTCCTCCTTTACTCCTATTGGAACCATGGTTCCGGCAAGTACTACGTTGTACTCGATTGCGGCAGCACCGGCACGCGCGTTTTTGTCTACCGCGCTTCCGTTCGGTTCCAACGTCGTAGCAGTCTTCCAATTGCTGTTGACTCCTTGAGGAATAGCTTGCACAAGAAGCCTCGTGGTCGAGCCTATGATCGAGTGGAGACCGAGCCTGGAATTGATAAACTAGTGCGCAACGTGTCTGGGTTGCACAAGGCGTTGAAGCCGTTGCTTAGGTGGGCCAAGAAGCAGATTCCAGTTCATGCTCATAAGTCTACTTCGTTGTTTCTTTTTGCCACTGCTGGGGTGAGGAGGCTTCCGGTTATTGATTCTATGTGGCTGTTAGATAATGCTTGGACTGTGCTTAAAAACTCTCCCTTTATGTGTGAGAGAGATTGGGTTAGGATTATCTCTGGCCCCGAGGAGGCTTATTATGGGTGGATTGCCCTTAATTATGATAATGGCATTTTGGGGGCTAGGCCTAGGAAGGCTACTTATGGCGCACTTGATTTGGGTGGCTCTTCTTTGCAGGTCACGTTTGAGAGTGATCAACAGATGAATAATGATACTAGTTTGTATGTTAGCATTGGATCTGTTAGACATCATCTCACTGCTTATTCGCTCCCGGGGTACGGTCTGAATGAGGCGTTTGGTAAGTCTGTGGACTATCTATATAGGAAGGAGGTTGCTTTAGGTAATTTTGATCTAGGCAGTAGTGGAAATATTGAGTTGAAGCATCCTTGCTTGCAGGATGGGTATAGGGATGAATACTTTTGTTCTCGTTGTTCATCTGATAACAAAGGTGGGAAAGAATTGGGTGGGGGTGGACGGTTGGGAACTTCATTAGTGCTTGTTGGTGCTCCTAATTGGAAGGAGTGCAGTGCAGTAGCGAAAGTTGCTGTGAATTTGTCTGAATGGTATGATCTTGGCGCAGGGCTTGATTGTGCAGCGCAGCCTTGTGCATTGCGTGACAATATGCCTCGCCCCTATGGACATTTTTATGTGATTTCTGGATTTTATGTTGTATTTAGGTTTTTCAACTTGACTTCTGAGGCTACACTTGATGATGTGTTGGCAAAGGGTAAGGATTTTTGTGAAAAGAGATGGGATGTTGCAAAGGCAAGTGTTGTTCCGCAACCCTTTATTGATCAGTATTGCTTTAGGGCACCGTACATTACCTCTCTGCTGAGGGAGGGTTTGCACATTAAGGATAATCAGATAAGTGTTGGCTCCGGAAGTATCACCTGGACACTTGGGGTTGCCTTGTTGGAAGCTGGAAAGGCATTCTCCACTAGATTTGGGATTCGTGATTTGGAGTTGTTCCGGATCAAGATAAATCCTCTTGCTCTTGTGCCTATTCTGTTGCTTTCATTTATTCTACTTCTTTGTGCTTTATCATGTATTGGCAAATGGATGCCAAGGTTTGTCCGGAGGCAATATCTTCCAATTTCCAGGCATAACAGTGTTTCTGCTGCTTCTGTTCTTACCATGCCGTCTCCTTTTCGGTTCCAGCATTGGAGCCCAGTGAACTCTGGGGATGGAAGGTCAAAAATGCCACTCAGCCCAAAAATTGCAGATTCACAACAAAGTCCGTTTGGTCTGGGGCATGGGCTAGATGACAACAATGGTGGCATCGAGCTTATGGAGTCTTCATCGTACCCATCAGCCAGTAATGTCTCACACAGCTATTCCTCAAACAGTTTAGGGCAGATGCAGTTTGACAGTAGCAACATGGGTGCCTTCTGGTCCTCCTACAGGAGTCAGATGCATCTGCAGAGTAGGCGATCGCAGTCTCGAGAAGATCTCAATTCCTCATTGGCTGAAGTTCATCTGGTCAAGAGTTAG 2118 0.4669 MVFTRIASLVSTKFPNSNSSTSLSNNIRISSSLQDLSSYRHVDATVPLHKLPTPSTSSRRRCLKIALFLASFFLLTYLLFFLLYSYWNHGSGKYYVVLDCGSTGTRVFVYRASVRFQRRSSLPIAVDSLRNSLHKKPRGRAYDRVETEPGIDKLVRNVSGLHKALKPLLRWAKKQIPVHAHKSTSLFLFATAGVRRLPVIDSMWLLDNAWTVLKNSPFMCERDWVRIISGPEEAYYGWIALNYDNGILGARPRKATYGALDLGGSSLQVTFESDQQMNNDTSLYVSIGSVRHHLTAYSLPGYGLNEAFGKSVDYLYRKEVALGNFDLGSSGNIELKHPCLQDGYRDEYFCSRCSSDNKGGKELGGGGRLGTSLVLVGAPNWKECSAVAKVAVNLSEWYDLGAGLDCAAQPCALRDNMPRPYGHFYVISGFYVVFRFFNLTSEATLDDVLAKGKDFCEKRWDVAKASVVPQPFIDQYCFRAPYITSLLREGLHIKDNQISVGSGSITWTLGVALLEAGKAFSTRFGIRDLELFRIKINPLALVPILLLSFILLLCALSCIGKWMPRFVRRQYLPISRHNSVSAASVLTMPSPFRFQHWSPVNSGDGRSKMPLSPKIADSQQSPFGLGHGLDDNNGGIELMESSSYPSASNVSHSYSSNSLGQMQFDSSNMGAFWSSYRSQMHLQSRRSQSREDLNSSLAEVHLVKS* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0904 705 Gene3D Exopolyphosphatase. Domain 2 229 502 - -
Vra11g0904 705 Gene3D - 86 228 - -
Vra11g0904 705 PANTHER GDA1/CD39 NUCLEOSIDE PHOSPHATASE FAMILY PROTEIN 55 677 - -
Vra11g0904 705 Pfam GDA1/CD39 (nucleoside phosphatase) family 90 514 IPR000407 GO:0016787
Vra11g0904 705 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 55 677 IPR000407 GO:0016787
Vra11g0904 705 MobiDBLite consensus disorder prediction 684 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0904 Vra-Chr11 7745247 7749025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0904 25 704 Nodulin-like Gene Family AT4G19180 55.824 0.0 752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0904 - - gmx:100787212 1063.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0904 11 7745247 7749025 Vra7g0305 7 4753418 4760699 PCT