Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0893 ATGATTCCCCTCCAATGCAACAACATGGGTGGATACTCCGCCGCCATCGCCGTCATCACCACCATCCTCTTCTTGTTCCCGCCGCCGACTTCCCAGGCCCAGATTCTCAACACAGAAGACCACGTTTTCGGCCCCTTCAACCAATCTTACTTCAACACGTTCGCGGTGTTGCCCAGCGCCGCCATCAACCTTGAAGCGCTCCAAGTAACACCAGACAGCACAGGCAACGTGTCCCTGACCAACCGCTCCGGCAGAATCTTCTTCAACACCCCCTTCACTCTCTGGAACGACGAAAACAGCCTCGACGAAAAGCCCGTCTCTTTCAACACTTCCTTTCTGATAAACGTGTATCGTCCCAAAAACGATACTCCCGGCGAGGGCATCACCTTCTTTATCGCCCCTTCTACCTCCGCCCCCCCTCCCAACAGCTACGGCCAGTTTCTCGGCCTCACGAACGCCTCCAACGATGGCAACCGCACCAACCAAATCCTCGCCGTCGAACTTGACACCGTGAAGCAGGACTTCGACCCCGACGACAACCACCTCGGCCTGGACGTTAACGGCGTGAGGTCCATCGTCACCGTGCCTCTCACTCCCTTGGGGTTCGAGATCGCGCCCAACGTCACGCGCTTCCACGTGCTGTGGGTGGAGTATGACGGTGGCCGGAAGGTGATCGACGTGTACATCGCGGTGCAGCCTGATAAGGATGCGCCCATAGTGCCGAAACCGGCTAAGCCGGTGTTGAGTTCAGCTATCGATCTGAAACAAGTGGTGAACAGGGTTTCTTATTTTGGGTTCTCTGCTTCGACCGGTGACAACGTTGAACTAAACTGCGTGCTGAGGTGGAACATTTCTATTGAAGTTTTTCCCAAAAAAAAGGGGATCGGAAATGCTTTGAAGATTGGGTTGGGTGTCGGAGTGCCTGTGGTGGTTCTTCTTGTAGCGGGTGTGGTGGGGTGGGTTTATTGGTTGTGGAGAAAGCAGAGAGAAAGTGAGACTGAGATTTTGGGAACTCTCAAGAGTTTACCTGGAACTCCCAGAGAATTTAGGTATCAAGAATTGAAGAAAGCCACTAATAATTTCGATGAGAAGCACAAGCTTGGACAAGGTGGATACGGCGTCGTATACAGAGGAACACTTCCGAAAGAGAAGTGGGAAGTAGCCGTCAAAATGTTCTCCAGAGATAAGATGAAAAGCACCGATGATTTCTTGTCAGAACTCACCATCATCAATCGCCTTCGTCACAAAAACCTTGTTCGTTTACTCGGGTGGTGCCACAGAAATGGGGTGTTGCTGTTAGTGTACGATTACATGCCGAATGGAAGCTTGGACAACCACATTTTCCGTGAGGAAGGGAGCAACACTACGGCACTGAGTTGGCCTTTGAGGTACAAGATCATAGCAGGGGTGGCTTCTGCATTGAACTACCTGCACAACGAGTATGATCAGAAAGTGGTCCACAGAGACCTTAAGGCCAGCAACATCATGCTGGACTCAGACTTCAATGCTCGTTTAGGTGACTTCGGGTTGGCTCGTGCGTTGGAGAATGATAAAACATCGTATGCAGAGTTGGAAGGAGTGCATGGCACAATGGGGTACATTGCACCTGAGTGCTTCCACACTGGGAGGGCCACAAGGGAATCTGATGTTTATGGGTTTGGAGCAGTGGTCCTTGAGGTGGTCTGTGGCCAAAGGCCATGGACCAAGAATGAGGGGTATGAATGCTTGGTGGATTGGGTATGGCACCTGCATCGTGAGCAAAGGATACTTGATGCAGTGGATCCAAGACTTGGGAATGACTGTGTGGCTGAAGAGGCAGAGAGGATTCTGAAACTAGGACTAGCTTGCTCTCACCCCATTGCCAGTGAAAGACCAAAGATGCAAACAATTGTTCAGATCATATCTGGTTCAGTGCCTGTGCCTCACGTTCCACCTTTCAAACCAGCTTTTGTGTGGCCAGCTATGGATCTATCAAGCCTTGCAAGTGACCTCACACAAACCACAACAACCGAGTACACACCCATGACAACAACCGAGTATACACCCATGAACAGTACCACGCATTCTATGCATGTTGATTTCTCAGATAGTGGCTCTCTTGTCTAA 2106 0.51 MIPLQCNNMGGYSAAIAVITTILFLFPPPTSQAQILNTEDHVFGPFNQSYFNTFAVLPSAAINLEALQVTPDSTGNVSLTNRSGRIFFNTPFTLWNDENSLDEKPVSFNTSFLINVYRPKNDTPGEGITFFIAPSTSAPPPNSYGQFLGLTNASNDGNRTNQILAVELDTVKQDFDPDDNHLGLDVNGVRSIVTVPLTPLGFEIAPNVTRFHVLWVEYDGGRKVIDVYIAVQPDKDAPIVPKPAKPVLSSAIDLKQVVNRVSYFGFSASTGDNVELNCVLRWNISIEVFPKKKGIGNALKIGLGVGVPVVVLLVAGVVGWVYWLWRKQRESETEILGTLKSLPGTPREFRYQELKKATNNFDEKHKLGQGGYGVVYRGTLPKEKWEVAVKMFSRDKMKSTDDFLSELTIINRLRHKNLVRLLGWCHRNGVLLLVYDYMPNGSLDNHIFREEGSNTTALSWPLRYKIIAGVASALNYLHNEYDQKVVHRDLKASNIMLDSDFNARLGDFGLARALENDKTSYAELEGVHGTMGYIAPECFHTGRATRESDVYGFGAVVLEVVCGQRPWTKNEGYECLVDWVWHLHREQRILDAVDPRLGNDCVAEEAERILKLGLACSHPIASERPKMQTIVQIISGSVPVPHVPPFKPAFVWPAMDLSSLASDLTQTTTTEYTPMTTTEYTPMNSTTHSMHVDFSDSGSLV* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0893 701 ProSitePatterns Protein kinases ATP-binding region signature. 367 390 IPR017441 GO:0005524
Vra11g0893 701 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 30 669 - -
Vra11g0893 701 Gene3D Phosphorylase Kinase; domain 1 346 437 - -
Vra11g0893 701 CDD lectin_legume_LecRK_Arcelin_ConA 51 283 IPR001220 GO:0030246
Vra11g0893 701 CDD STKc_IRAK 367 634 - -
Vra11g0893 701 Pfam Legume lectin domain 53 288 IPR001220 GO:0030246
Vra11g0893 701 MobiDBLite consensus disorder prediction 680 701 - -
Vra11g0893 701 Gene3D Transferase(Phosphotransferase) domain 1 438 638 - -
Vra11g0893 701 SMART serkin_6 361 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra11g0893 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 485 497 IPR008271 GO:0004672|GO:0006468
Vra11g0893 701 PANTHER - 30 669 - -
Vra11g0893 701 Gene3D - 39 296 - -
Vra11g0893 701 SUPERFAMILY Protein kinase-like (PK-like) 343 664 IPR011009 -
Vra11g0893 701 Pfam Protein kinase domain 362 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra11g0893 701 ProSitePatterns Legume lectins beta-chain signature. 164 170 IPR019825 -
Vra11g0893 701 ProSiteProfiles Protein kinase domain profile. 361 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra11g0893 701 SUPERFAMILY Concanavalin A-like lectins/glucanases 44 291 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0893 Vra-Chr11 7679626 7682930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0893 58 646 Receptor kinase-like Gene Family AT3G53810 39.486 5.88e-124 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vra11g0893 Pkinase 1.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0893 - - gmx:100780014 1163.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0893 11 7679626 7682930 Vra11g0893 11 7679626 7682930 ECH