Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0878 ATGGTCATGGAGGGAAGAGTCAGTGAGGATTTAACGCCCAGGTATTATGCCCTTTGTGCCATTGGAGGAATGCTCAGTGCTGGCACCACCCACCTTGCCATCACTCCTCTTGATGTATTGAAAGTGAACATGCAGGTGCACCCAATTAAGTATTACAGTATTTCCTCTTGCTTTACTACCTTATTGAGAGAACAAGGGCCTTCAGTCCTTTGGAAAGGTTGGACTGGCAAGTTCTTTGGCTATGGTGCTCAAGGAGGGTGCAGATTTGGTCTCTATGAGTATTTTAAAGGGGTTTATTCAAACGTATTGGTAGACCAGAACAAGAATTTTGTTTTCCTTCTCAGTAGCGCGTCCGCTGAAGTGTTTGCCAATTTAGCTCTATGTCCATTTGAAGCTGTTAAAGTGAGGGTTCAAGCACAACCCTGTTTTGCTAAGGGCTTGTTTGATGGCTTTCCAAAGTTATATGCGTCAGAAGGCACACGAGGATTCTACCGTGGACTAATTCCACTTTTGGGTCGAAACATTCCATTTTCCATGGTTATGTTCTCAACATTCGAGCATTCTGTTGATTTTTTGTATCGAAATATGGTCAAAAGAAAAAAGGAGGACTGTTCAATAGGTCAACAACTTGGTGTGACATGTTTAGCTGGGTACGCAGCTGGGTCTGTTGGTAGCTTCATTTCTAATCCTGCTGACAATATTGTATCTTCTCTATATAACAGAAAGGCTGATAGTCTTGCACTGGCCATCAGAAATATTGGGCTAGCCAATCTATTTACCAGGAGTCTTCCCATTAGAATGTTGCTGGTTGGTCCTTCTATAACTTTGCAATGGTTTTTCTACGACACCATCAAAATTTTAGGCCAACTAGTGGTGAAGTTACAACTGATACGAAAGGAGGTGGGAGAGCCTAAGATTAAGAAAAAAACAGAAATTTGCAGTCACATTTTTCAGGCTGACTTGGATGATTGCAAGTCATTTTATACTATGTATAGGATTACTTTTGCGGTAGCTTTAGTTTACTGTCACCATGTAGTCTGTTTTAATTTTTCATCATAG 1059 0.4108 MVMEGRVSEDLTPRYYALCAIGGMLSAGTTHLAITPLDVLKVNMQVHPIKYYSISSCFTTLLREQGPSVLWKGWTGKFFGYGAQGGCRFGLYEYFKGVYSNVLVDQNKNFVFLLSSASAEVFANLALCPFEAVKVRVQAQPCFAKGLFDGFPKLYASEGTRGFYRGLIPLLGRNIPFSMVMFSTFEHSVDFLYRNMVKRKKEDCSIGQQLGVTCLAGYAAGSVGSFISNPADNIVSSLYNRKADSLALAIRNIGLANLFTRSLPIRMLLVGPSITLQWFFYDTIKILGQLVVKLQLIRKEVGEPKIKKKTEICSHIFQADLDDCKSFYTMYRITFAVALVYCHHVVCFNFSS* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0878 352 Gene3D Mitochondrial carrier domain 17 290 IPR023395 -
Vra11g0878 352 ProSiteProfiles Solute carrier (Solcar) repeat profile. 14 98 IPR018108 -
Vra11g0878 352 ProSiteProfiles Solute carrier (Solcar) repeat profile. 107 191 IPR018108 -
Vra11g0878 352 SUPERFAMILY Mitochondrial carrier 15 283 IPR023395 -
Vra11g0878 352 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 287 IPR018108 -
Vra11g0878 352 Pfam Mitochondrial carrier protein 19 100 IPR018108 -
Vra11g0878 352 Pfam Mitochondrial carrier protein 110 195 IPR018108 -
Vra11g0878 352 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 4 296 IPR044677 GO:0005315|GO:1990547
Vra11g0878 352 PANTHER PHOSPHATE CARRIER PROTEIN 4 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0878 Vra-Chr11 7438584 7442566 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0878 3 287 Chloroplast and Mitochondria Gene Families AT2G17270 66.434 9.08e-148 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0878 K15102 - gmx:100788974 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0878 11 7438584 7442566 Vra11g0878 11 7438584 7442566 ECH