Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0875 ATGAATAGTTCAGAGTTTAGAAAGCTGTTTTCTTTGGTGGTGGGGGTGCTGCCTTTGTGGTTATTATGGTTTGGAGGTTCGGCCATGGCAGCGAGTGAAAGTGGCAGCAGTTCCAGAGAGCTCGACCAGACACCAACGTGGGCCGTTGCTGTCGTGTGCACTGTTTTCATTTTGATTTCCATGGCACTCGAAAAAAGTCTCCATAAAGTTGGGACGTGGCTTGGAAAAAAGCAAAAGAAGGCTTTGCTCGAAGCCCTGGAGAAGGTCAAGGCTGAGTTGATGATTTTGGGTTTCATTTCACTGCTTTTGACTTTCGGGCAGAGTTACATTGTCAAAATATGTATTCCTGAAAAGCTGGCAGACAACATGTTGCCATGTCCATATAAATATAAGGATGCTGAAAAGGCATCAGACGATGGAGAGAAACATCGTAGAAAACTTTTGTCTTATGAACGTAGATATTTAGCTGCTGATACTACCTCGTTTAAATGCAGCAATGAGGGACATGAGCCACTATTATCCGTGAATGGTTTGCACCAGTTACACATCCTCATATTCTTCTTAGCAGTCTTTCATGTGCTTTACAGTGCTATCACAATGCTTCTTGGAAGACTGAAGATACGTGGATGGAAGGCATGGGAGGCAGAGACTTCAACTAATAATTTTGAGTTCGCCAATGCTGCTTCAAGATTTAGGCTTACTCATGAAACATCATTCGTGAGAGCTCATGCAGATTTATGGACAAGGATTCCCATTTTCTTCTATATTAGATGCTTCTTTAGGCAGTTTTATAGGTCTGTAACTAAGACTGATTACCAGACTTTGCGGAACGGGTTTATCACTGTGCACCTGGCTCCTGGAAGTAAATTTAATTTCCAAAAGTATATCAAAAGATCATTTGAAGATGACTTCAAGGTGGTTGTGGGAGTCAGTCCTGTTCTCTGGGCATCAGTTGTAGTTTACCTTCTCGTCAATGTTAATGGATGGCGTACCACACTTTGGGCAGCCGCAATTCCTGTTGTTATAATTTTGGCAGTTGGAACAAAACTTCAAGCCATATTGGCAAAGATGGCGATTGAAATCACCGACAGACATGCAGTTGTCCAAGGAATACCTCTTGTCCAAGGCTCAGACAAATACTTTTGGTTTGGTCAGCCACAGTTAGTCCTTCACCTTATCCATTTTGCTTTGTTCCAGAATGCGTTCCAAGTAACATATATCTTGTGGATATGGTATTCATTTGGGGTGAGAAACTGTTTCCGTAATGATTACAAGCTTGCAATAATGAAAGTAGCTTTAGGGATTGTGATGCTATGCCTCTGCAGCTACATCACCCTCCCATTATATGCTCTTGTAACGCAGATGGGTTCAAGGATGAAAAAAGCGATCTTTGACGAGCAAACAAACAAGGCTCTAAGGAACTGGCACATGGCTGTGAAAAAGAAGCAAAGGGTGGTGAAGCTAGGAAAGTTCAATGCAGAATCTGTTGATGGAAGCCCCGCTGCTTCATCTTCAGCCGTACACCCTTCTGGGCCTACACTTCACCGTTTCAAAACCACCGGCCATTCCACCCGCTCCCAGTCGTACGAGGATCAAGATCATGAATACGAGTCCGATGTTGAGTTGTCTCCTGAGTTGTCCCAAACAGCCAGCTTCATTGTGAGAATGGATCATGCTGATCACCAACAACTACAAGAACATGAACATTCTGAGGAAGAAACCAACTCCAGTGAAGAAGCTGAATTCTCTTTCAAACCTAGTGATCTTGTGGAAAAACCACCACATAGCTTATAA 1794 0.4309 MNSSEFRKLFSLVVGVLPLWLLWFGGSAMAASESGSSSRELDQTPTWAVAVVCTVFILISMALEKSLHKVGTWLGKKQKKALLEALEKVKAELMILGFISLLLTFGQSYIVKICIPEKLADNMLPCPYKYKDAEKASDDGEKHRRKLLSYERRYLAADTTSFKCSNEGHEPLLSVNGLHQLHILIFFLAVFHVLYSAITMLLGRLKIRGWKAWEAETSTNNFEFANAASRFRLTHETSFVRAHADLWTRIPIFFYIRCFFRQFYRSVTKTDYQTLRNGFITVHLAPGSKFNFQKYIKRSFEDDFKVVVGVSPVLWASVVVYLLVNVNGWRTTLWAAAIPVVIILAVGTKLQAILAKMAIEITDRHAVVQGIPLVQGSDKYFWFGQPQLVLHLIHFALFQNAFQVTYILWIWYSFGVRNCFRNDYKLAIMKVALGIVMLCLCSYITLPLYALVTQMGSRMKKAIFDEQTNKALRNWHMAVKKKQRVVKLGKFNAESVDGSPAASSSAVHPSGPTLHRFKTTGHSTRSQSYEDQDHEYESDVELSPELSQTASFIVRMDHADHQQLQEHEHSEEETNSSEEAEFSFKPSDLVEKPPHSL* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0875 597 PANTHER MLO-LIKE PROTEIN 25 580 - -
Vra11g0875 597 MobiDBLite consensus disorder prediction 556 597 - -
Vra11g0875 597 MobiDBLite consensus disorder prediction 495 540 - -
Vra11g0875 597 MobiDBLite consensus disorder prediction 497 526 - -
Vra11g0875 597 Pfam Mlo family 39 508 IPR004326 GO:0006952|GO:0016021
Vra11g0875 597 PANTHER MLO-LIKE PROTEIN 1 25 580 IPR004326 GO:0006952|GO:0016021
Vra11g0875 597 MobiDBLite consensus disorder prediction 559 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0875 Vra-Chr11 7388389 7392808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0875 30 587 MLO family AT2G17480 60.071 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0875 K08472 - gmx:100790155 933.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0875 11 7388389 7392808 Vra7g0228 7 3467100 3473065 PCT