Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0863 ATGGGAGGCTTATTACACTTTTTTGAATTCAATCAGGGGAGGATGGCCAAGAAAGTCCTTGCTCGGAAGAGACATCATGGTGGCCTGGAAGCTCCTCGAAATAGTCTAGATCTGCAAGTACAAACACCTCAGAACTACTGCCCACAAGGAGAATTATCATGCAATTATCAAGTGGAAGAAGTGGGCAGGCCTGAGAATAATCGTTATTCAAACGTGGGTTCAATGAAAAAACTGATCAATGAGGAGCTATCCAAACAATCAAGCACCAGGCAAAATGCGCCAAGCCTTGTGGCAAGGTTGATGGGGATAGATACGATGCCATTAGACACTAAATATGTTGTCCCATCAGATAAAAGAATGAGTGAAAACGTGGGGAAGAAGTCTTCAGAGAAAGGAGTGAGTCGAAGGGGTTCAGTTAGTTGGGGTTCTTCTAACTTTAATTCTTCGAGCCAGATGGATTTTGAGTCATTATACGAAGACATGGATGTTGATGACAACGATGATGGGTGGAACAAGAGTTTTGGAGAACCAAGGCGGCGGGATCATCCTCAGGAAGAGGAACTACAGAAATTCAAGAAAGAGTTTGAAGCATATCAAGCAGCAAGGTTTCAAGAGTGTTCGAAGGTTGCTGAAATTGATAGTGTTCCTAAATGGTTGCTAGTTCAGGAAAACTCGAACAAGGAAAAGGTGATTCATAGTGATTTAGTTTTACAAAGAGCAGCAGCAGGGAAACCTGCAGATCTTGATAGCCATTCATTCAAAACACCACCACCTGAATATTATGGTTCAGAATATCGTGGTGACATGATGGAGTTAGTCCCAGCTACTCAAAGGAAAACCTTTCCTCCTAGGAGCAGAACATTAAGTAGAGACTTTGAGGAGTCCTTAATGATGAAATCCTGCAACAGATTAGACACGTCTGCTTCTCCCACCAGGATAGTTATCTTGAAGCCTGGTCCTGAGAGCATTAGCAACCATGAAGAGAATTGGACCATTTCAACAGGAACTATACAAGGGAGAAATAGTATAGAAGATTTTCTTGAAGAGGTGAAAGAGCGTTTGAAATGTGAACTGCAAGGGAAAATTGTCAAAAAGATTTCTGTGGTTCGAGGGAGTGGAATTGAAACACCTTACAATGAAAAACCATCCAATCCTAAACTAATAGCTCGACATATAGTAAAGCAAGTCAGAGAAAGTGCGACCAGAGATGCTGACACAAATTTACTCCATTCTGAATCAACAGGGTCGTTCAAGAGTGAAATGCAATTCAATGGAGCAACTTCCCCTGAAGTTATCAGCAGAGATACCCGGAAGTTCTTGTCAGATAGGCTTAGAAATGTTGTGAGAAGTGAAGCACGTGCTGGTTTTCTCGAGGGAAAATCAAGGTCACTTGCATTAGATAGTCATAAAGATGGACTAAAGCAAGGGGGGGATATTATGAAGTACGCAAGTAACTGGGAAATTTCCAAAGAGGACGGAGAAATACAAACAGGTTCTTTCAGACATGAACTGGATGAAAATATATTTCTGCACAAGGAGTTGTCTCCAAGGAATCTTGTAAGATCCTTGTCTGCTCCTGTATCACGATCAGGAACATCATTTGGGAAGCTTCTTCTGGAGGACCGCCACCTTTTAACTGGTGCACAGATTCGGAGGAAGCTTGAAGCTGTTGAAACTATGTCCGTTGATGTCAAGAAACGGAAAAAGGATAGATTTAATATTAAGGAACGAGTCTCCAGTTTTAAATATAATCTTGCTTTAAGAGGGAGGCTTTTTGGCAGAAGGGTTCAATCAACGGTGGAATCACGTGCCAATGAGTATGGTCCCATGGTGAGAGATGTCACAAGTGGACCAACAGTTCTCATGAACTGCGGTGAGCGGCATGAGAACTCCACTGAGGTACCTCCGAGTCCTGCATCTGTATGCAGCAGCATTCATGAAGACTTTTGGAGGCGGACTGAATATTTAAGTCCAATATCAACTCCTGATGTCTCTTCAAGGGATGATACTGCTGTGCCACAGGTTTTCAGGGATATCAGCTCTGGTTTGAATGAACTAAGGAGGCAACTCAATCAACTTGAATCTGATGGTCCTGAGGACTTCACTATGAAACATGAGGCCTCGGAGTCTGACTTGGACCAACTAGAGGATCCAGCGGAATCTTACATAAGAGACCTACTTGTTGCTTCTGGACTATACTTTGGTTCATGGGACAAGTCTTTATTAAGAGTGGACACATTTGCAAAGCCTATTGGCAACTCAGTTTATGAAGAAGTGGAAGAATCTCGCAGGAAATGGGTCAAGGAAGATGATGACAGCTGCATCAAGGATCACAATAAGAATAAACCAGGCCACAAAGTTTTGCTTGATCTGTTAAATGAAGCACTTTCAGTTGTTCTCGGACCTCCATTGACATTGTCCAGATTCAGAAAAAAACTAAGTAACTCTTCCATGTTGCTACCTTCTGGAAAGGAACTATTGAACTTAGTGTGGGACATTATCCGTGTTTCTATATATCCTCCATCTGACATATCTACTTATTCACTTGATGATTTGGTGGCTCAACACCTAGGATCCATCCCCTGGTCTGAATTAATAAACGATGAGATCAATATTTTGGAAAGAGATATAGAATGTCTAATAACTGATGATCTGGTTGAAGAACTCACAAAGGATATATGTTCTAAGATGAAGTGA 2697 0.4182 MGGLLHFFEFNQGRMAKKVLARKRHHGGLEAPRNSLDLQVQTPQNYCPQGELSCNYQVEEVGRPENNRYSNVGSMKKLINEELSKQSSTRQNAPSLVARLMGIDTMPLDTKYVVPSDKRMSENVGKKSSEKGVSRRGSVSWGSSNFNSSSQMDFESLYEDMDVDDNDDGWNKSFGEPRRRDHPQEEELQKFKKEFEAYQAARFQECSKVAEIDSVPKWLLVQENSNKEKVIHSDLVLQRAAAGKPADLDSHSFKTPPPEYYGSEYRGDMMELVPATQRKTFPPRSRTLSRDFEESLMMKSCNRLDTSASPTRIVILKPGPESISNHEENWTISTGTIQGRNSIEDFLEEVKERLKCELQGKIVKKISVVRGSGIETPYNEKPSNPKLIARHIVKQVRESATRDADTNLLHSESTGSFKSEMQFNGATSPEVISRDTRKFLSDRLRNVVRSEARAGFLEGKSRSLALDSHKDGLKQGGDIMKYASNWEISKEDGEIQTGSFRHELDENIFLHKELSPRNLVRSLSAPVSRSGTSFGKLLLEDRHLLTGAQIRRKLEAVETMSVDVKKRKKDRFNIKERVSSFKYNLALRGRLFGRRVQSTVESRANEYGPMVRDVTSGPTVLMNCGERHENSTEVPPSPASVCSSIHEDFWRRTEYLSPISTPDVSSRDDTAVPQVFRDISSGLNELRRQLNQLESDGPEDFTMKHEASESDLDQLEDPAESYIRDLLVASGLYFGSWDKSLLRVDTFAKPIGNSVYEEVEESRRKWVKEDDDSCIKDHNKNKPGHKVLLDLLNEALSVVLGPPLTLSRFRKKLSNSSMLLPSGKELLNLVWDIIRVSIYPPSDISTYSLDDLVAQHLGSIPWSELINDEINILERDIECLITDDLVEELTKDICSKMK* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0863 898 MobiDBLite consensus disorder prediction 165 185 - -
Vra11g0863 898 MobiDBLite consensus disorder prediction 114 145 - -
Vra11g0863 898 MobiDBLite consensus disorder prediction 167 185 - -
Vra11g0863 898 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 894 - -
Vra11g0863 898 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 894 - -
Vra11g0863 898 Pfam Domain of unknown function (DUF4378) 721 888 IPR025486 -
Vra11g0863 898 Pfam DUF761-associated sequence motif 89 107 IPR032795 -
Vra11g0863 898 Coils Coil 676 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0863 Vra-Chr11 7284697 7290513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0863 75 893 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 39.977 1.21e-150 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0863 - - gmx:100789616 1480.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0863 11 7284697 7290513 Vra11g0863 11 7284697 7290513 ECH
Vra11g0863 11 7284697 7290513 Vra7g0216 7 3233941 3239179 PCT