Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0850 ATGGAAAAGGAGAACCCTTCTTTGGGTGCATTCTCCAACAAGTCTCTATCTGCTCCCTCTGGTGACACCCTCACTCTAATTATCAATCAGCAGGATGAAAGCACCATGAAAACCCCTTGGCAAGTGTTGGATGAACTTCGTGATGAAAGTAGTGATGACGGTGAAAATGACGTTGGTGGTGGGAGTGGTAATCACAGAAGAGGGAAGAGTGGTGTTGGTGATGGAAGTGGTGACCATAATGACAATGGAGTTCGTGGCCGGATTGGTGGTGAGAATGATAATGGTGGTGAGAATGGTAATGGGGTTCCTCCTGTGGCTGTGGCGGTGGCTGTGGCAGTGGGTGGTGGTGGTGGTAAGGTGGAGCAGGTGGAGAGTGGTGTTGTGAAGGAGGGAGTGATGGGGAAAAAGAGAAAAACTTCTATAGTGAGAGACCCTCCCTCTGGGAAACCTACTTGTCCTCTTTGCCTCAAACAGTTTCCAACATGGAAGGGTGCGTTTGGCCACATGCGGGCACACCCTGATCGTGATTATCGTGGTTTCTTCAAACCTCCTGTGTTTGGATCTCCATCCTCAACCCTAAACAAGGGTGACACCTCACAGAGTGGTGATGGTGAAAACAAGAGTACTGGTGAGGTTAACCATGGAGAGAAAGGGTCAGCATCGCTGCCTATTCAAGTTCTGATGTTTGATCTGAATGAACCAGCAACTGCAGTGGAGAATGCTGGTGAGGCTGTTACAGAAAAGAGTGATGAGAATGGAAAGATTTTTGGATTTGACTTGAATGCTGAGGGAACTGTTTTTGGATTTGACTTGAACGAGATGCCCTTGGCTGAAGAATGA 840 0.4798 MEKENPSLGAFSNKSLSAPSGDTLTLIINQQDESTMKTPWQVLDELRDESSDDGENDVGGGSGNHRRGKSGVGDGSGDHNDNGVRGRIGGENDNGGENGNGVPPVAVAVAVAVGGGGGKVEQVESGVVKEGVMGKKRKTSIVRDPPSGKPTCPLCLKQFPTWKGAFGHMRAHPDRDYRGFFKPPVFGSPSSTLNKGDTSQSGDGENKSTGEVNHGEKGSASLPIQVLMFDLNEPATAVENAGEAVTEKSDENGKIFGFDLNAEGTVFGFDLNEMPLAEE* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0850 279 MobiDBLite consensus disorder prediction 187 208 - -
Vra11g0850 279 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 34 277 - -
Vra11g0850 279 MobiDBLite consensus disorder prediction 1 101 - -
Vra11g0850 279 ProSitePatterns Zinc finger C2H2 type domain signature. 152 172 IPR013087 -
Vra11g0850 279 MobiDBLite consensus disorder prediction 8 38 - -
Vra11g0850 279 PANTHER TRANSCRIPTION REGULATORY PROTEIN SNF2-LIKE 34 277 - -
Vra11g0850 279 MobiDBLite consensus disorder prediction 183 219 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0850 126 194 C2H2 Transcription Factor Family AT2G26940 40.580 7.02e-08 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vra11g0850 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0850 - - pvu:PHAVU_002G115500g 374.015