Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0844 ATGGCTTGTCTCAGCCGCCACCACCACCGCGCCTGGCTCACTACCCAAGACATGCTCCAACGCTGCCCTCTCTCCGCTCACCACCGCCTTCTCCACGATGACGCCGACTCAAACCCCATTAACGTCCCCTCTCTCTCCTCCGCCTACCGTCTCTTCCCCGTTTACGCCATGGGCGCCCTCGACCCCACACCCGAACCCGAATTGGACGGACCCGATCCTATTTGGAACGCTGTCAGAGAGGAGGCAAAGCTCGAGGCCGAGAAGGAGCCGATTTTGAGTAGCTTCTTGTACGCTAGTATTTTGGCGCACGATTGCTTCGAACAAGCATTGGCCTTTGTCGTCGCCAACCGTCTCCAAAACGCTACTCTCTTGGCCACCCAGCTCATGGATATTTTCTGCAATGTCATTATGTATGACAAACCTATCCAACGATCCATTCGCCTTGATGTTCAGGCATTTAAAGATCGGGACCCTGCATGTTTGTCCTATTGCTCCGCACTTTTGTACATGAAGGGTTATCATGCTCTGCAAGTACATCGAGTAGCCCATGCATTGTGGCACCAGGGACGCAAAGTCTTGGCCCTGGCTTTGCAAAGCCGTGTTAGTGAGGTTTTCGGAGTGGACATTCATCCAGCTGCGAAAATTGGGGAGGGAATTTTATTAGATCATGGGACAGGTGTGGTTATTGGTGAAACTGCTATTATTGGAAACAGAGTTTCATTGATGCACGGTGTAACGTTAGGAGGCACAGGAAAGGAAATTGGTGATCGCCATCCCAAAGTAGGTGAAGGGGCACTAATTGGAGCTAGTGCAACCATACTTGGGAATATAAAGATTGGTGAGGGTGCGATGATAGCCGCAGGTTCCCTCGTGTTAAAAGATGTTCCTCCCCACAGCATTGCGGCAGGAATACCAGCTAAAGTTATTAGTGGTCTAGAGGACCATGATCCATCTTTAGCCATGAAGCATGATGCTTCTAAAGATTTTTTCACACAAGTAGCTACTAACTTCAGAGATGAAAAGCCCAATGGAGCTCAAAATCCAGATAGAAATGAAGTGAACAATTAA 1068 0.4944 MACLSRHHHRAWLTTQDMLQRCPLSAHHRLLHDDADSNPINVPSLSSAYRLFPVYAMGALDPTPEPELDGPDPIWNAVREEAKLEAEKEPILSSFLYASILAHDCFEQALAFVVANRLQNATLLATQLMDIFCNVIMYDKPIQRSIRLDVQAFKDRDPACLSYCSALLYMKGYHALQVHRVAHALWHQGRKVLALALQSRVSEVFGVDIHPAAKIGEGILLDHGTGVVIGETAIIGNRVSLMHGVTLGGTGKEIGDRHPKVGEGALIGASATILGNIKIGEGAMIAAGSLVLKDVPPHSIAAGIPAKVISGLEDHDPSLAMKHDASKDFFTQVATNFRDEKPNGAQNPDRNEVNN* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0844 355 Gene3D Hexapeptide repeat proteins 208 336 - -
Vra11g0844 355 CDD LbH_SAT 205 305 IPR045304 -
Vra11g0844 355 Pfam Bacterial transferase hexapeptide (six repeats) 258 291 IPR001451 -
Vra11g0844 355 Pfam Serine acetyltransferase, N-terminal 74 177 IPR010493 GO:0005737|GO:0006535|GO:0009001
Vra11g0844 355 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 267 295 IPR018357 GO:0016740
Vra11g0844 355 SUPERFAMILY Trimeric LpxA-like enzymes 73 322 IPR011004 -
Vra11g0844 355 SMART SATase_N_2_a 74 178 IPR010493 GO:0005737|GO:0006535|GO:0009001
Vra11g0844 355 Gene3D serine acetyltransferase, domain 1 63 207 IPR042122 -
Vra11g0844 355 PANTHER SERINE ACETYLTRANSFERASE 2-RELATED 20 338 - -
Vra11g0844 355 TIGRFAM cysE: serine O-acetyltransferase 146 307 IPR005881 GO:0005737|GO:0006535|GO:0009001
Vra11g0844 355 PANTHER SERINE ACETYLTRANSFERASE 20 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0844 Vra-Chr11 7054352 7058863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0844 52 344 Miscellaneous Gene Families AT2G17640 73.559 3.27e-150 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0844 K00640 - gmx:100775449 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0844 11 7054352 7058863 Vra11g0844 11 7054352 7058863 ECH
Vra11g0844 11 7054352 7058863 Vra7g0196 7 2974367 2976847 PCT