Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0837 ATGCTGCACTTCAACATGTCTAAATCCACAAACTCTGTTTTTAAATCTTTCCATACACTTCTATACATATATATATCTTTCATGGCTTCCCTTGATGGTCAGAAAAGTAATGAAACTCCACCGAATCATGTTGAGATTCCTGTGGGTGCAGTTGGTGTGGAGCCAAAAGCAAACCGAGAAATCCTTGAAGAGAAAAACATAGACTATTCCCAGAGGGCGAATTGGGTGCGTGCAGCAGTGTTAGGAGCGAACGATGGTTTAGTCTCGGTTGCATCATTGATGATGGGTGTTGGAGCTGTTAAGGAGCAGATGACAGCGATGCTTCTTGCTGGTTTTGCAGGGTTAATTGCGGGAGCATGCAGCATGGCAATTGGAGAGTTTGTGTCTGTGTACACTCAGTATGACATAGAAATAGCTCAAATGAAAAGAGAGAGAGAAAACAAGAGTATTCGTGATGGAGTGAGTGAAGAAGCTGAAAGAGAAAAGTTACCAAATCCATTTCAGGCTGCTGTAGCATCAGCTCTAGCATTTTCTGTGGGTGCAGTGGTGCCACTGCTGTCTGCTGCATTCATAAAAAACCATAAAATAAGACTTGGTGTTGTTGTTACGGTGGCTAGTCTCACATTGGTGGTGTTTGGAGGGTTAGGAGCAGTGGTCGGAAAAACTCCGATCACAAAATCTTGCCTTAGAGTGCTGATCGGAGGTTGGATGGCTATGACTGTAACATTTGGCTTCACCAAGTTATTTGCCTTTGCTGGGATTTGA 765 0.4353 MLHFNMSKSTNSVFKSFHTLLYIYISFMASLDGQKSNETPPNHVEIPVGAVGVEPKANREILEEKNIDYSQRANWVRAAVLGANDGLVSVASLMMGVGAVKEQMTAMLLAGFAGLIAGACSMAIGEFVSVYTQYDIEIAQMKRERENKSIRDGVSEEAEREKLPNPFQAAVASALAFSVGAVVPLLSAAFIKNHKIRLGVVVTVASLTLVVFGGLGAVVGKTPITKSCLRVLIGGWMAMTVTFGFTKLFAFAGI* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0837 254 CDD Nodulin-21 75 223 - -
Vra11g0837 254 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 28 249 - -
Vra11g0837 254 Pfam VIT family 76 149 IPR008217 GO:0005384|GO:0030026
Vra11g0837 254 Pfam VIT family 159 246 IPR008217 GO:0005384|GO:0030026
Vra11g0837 254 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 28 249 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0837 Vra-Chr11 6937539 6938427 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0837 63 254 Nodulin-like Gene Family AT3G43660 64.583 6.44e-89 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0837 K22736 - gmx:100817158 318.161