Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vra11g0820 | ATGGCGGACACTGGTGGCGACGATAATGGCGTCACCTATCTTCACGGTGACCTCGATTTGAAAATTATCGAGGCAAGGCACTTGCCGAACATGGACATCTTCTCGGAGCGTCTTCGCCGCTGCGTAACCGGCTGCGACACTATCAAATTCCACTCCGAGGACCCCGCCGAGAGTGGAAGCCAGCGGACGCGGCAGCGCCACCACCGCAGGATCATAACAAGTGACCCGTACGTGACGGTTTCGGTGCCGCAGGCGACGGTGGCACGCACGCGCGTGCTGAAGAACTCGTCGGATCCTCTGTGGAACGAGCGGTTCCACATCCCGCTCGCGCATCCGGTTGTGGATTTGGAGTTCCGCGTGAAGGACGACGACGTTTTCGGCGCGCAGATAATTGGGACCATGAAGATTCCGGCGCAGCGGATTGCCACAGGCGAGTTGATTTCCGGCTGGTTCCCTGTCGTCGGGCCGTCTGGGAAGCCGGCGAAGCCGGACACGGCGCTGCACGTGGAGATGAAATTCATGTCGGTGGAGAAGAATTTGCTTTACAAGCGAGGCATTGCGGCGGATCCGGAGCAACGCGGAGTGAGGCACACGTATTTTCCGGTGAGAAAGGGGAGTTCGGTGAGGTTGTACCAGGATGCGCAATGTCCTGAAACTGGCGGAGCGAAGTTGCCGGAGGTTAAGCTTGAGAATGGAGAGGTTTACAGGCACGGAAAGTGTTGGGAGGATATTTGTTATGCCATATCCGAGGCTCATCACATGGTGTATTTGGTGGGCTGGTCGATTTACCATAAGGTGAAGCTTGTTAGAGAGCCTACTAGGCCGTTGCCACGAGGTGGCGATTTGACGCTTGGCGAATTGCTGAAGTATAAGTCTGAAGAAGGGGTGAGAGTGCTGTTGCTGGTTTGGGATGATAAAACTTCGCACGACAAGGTTTTCCTCAAGACGACTGGTGTGATGCAGACTCATGATGAGGAAACCAGGAAGTTTTTTAAACATTCTTCAGTAATGTGTGTTCTGTCGCCTCGGTATGCCAGCAGCAAGATGAGCTTCTTGAAGCAACAGGTTGTTGGAACGGTCTTCACACACCACCAAAAATGTGTGATCGTGGACACACAGGCCACGGGGAATAATCGGAAGATAACTGCTTTTATTGGAGGTCTTGATCTTTGTGATGGTCGCTATGACACACCTGAGCATCGTCTGTTTCGTGATCTTGACACTGTATTTTCTGAGGATTTCCACAATCCTACATTTCCTGCTGGAACAAGGGCTCCTAGACAACCATGGCATGATTTACACTGCAGAATAGATGGACCTGCTGCATATGATGTTCTTATTAATTTTGAGCAGCGATGGAAAAAGGCAACTAAGTGGAAAGAATTTGCGATCCTTTTCAAAAAATCCTCTCAATGGCATGATGATGCTTTGATAAGAATAGAACGCATCTCATGGATATTAAGTCCTTCCGTTACCACGAAGGAGAATTATACAGTTGTTCCAGAGGATGATCCTTTAGTATGGGTTTCTAGGGAAGATGATCCTGAAAACTGGCATGTTCAGATCTTCCGCTCCATTGACTCAGGGTCCCTCAAAGGATTTCCCAAACATGTTGATGTTGCTCTGTCCCAGAATCTTATTTGTGCTAAAAGTTTGGTCATAGAAAAAAGCATTCAAACAGCGTACATTGAAGCAATAAGATCTGCTCAACACTTTATTTATATTGAAAACCAGTACTTCATTGGATCATCGTATGCATGGCCTTCTTATAAAGATGCAGGGGCTGATAATCTTATTCCAATGGAGTTGGCACTGAAAATTGCTAGTAAAATCAGAGCTAAGGAAAGGTTTGCTGTCTATGTTGTTTTACCAATGTGGCCAGAAGGTGATCCAAAAACTGGGGCTATGCAAGAAATCCTCTTTTGGCAGGGCCAAACAATGCAAACAATGTATAACGTAGTTGCTAGGGAGTTAAAAGCAATGCAACTTTCTCATATAAACCCACAAGATTACCTCAATTTTTATTGCCTTGGTAATCGGGAAGACTTCAGTGAAGAAAGTTCAAGCACGTCTCAGGAGCATATAAATATCGCAGATTTATGATTTATGTGCATGCTAAGGGAATGATCGTTGATGATGAGTATGTTATAATTGGATCTGCTAATATAAACCAAAGATCTATGGCTGGTACTAAAGATACTGAGATAGCTATGGGTGCATATCAACCCCATTACACATGGTCAGCAAAGCAAAGACATCCATATGGTCAGATTTATGGTTACAGAATGTCACTTTGGGGAGAGCATCTTGGCATGTTAGATGAAACTTTTGGGGAGCCAGAGAGTTTGGAGTGTGTGCATACAGTGAATCAAATTGCTGAAAACAATTGGAAATTATTCGCTTCTGAAGATTTCTCGCTATTGCAAGGACATCTTCTTAAGTATCCTGTAAAGGTAGATTCTGATGGAACGATTAGATCCCTACCGGACTGTGAGAATTTTCCCGATGCTGGCGGTAAGATATTAGGTGCTCACTCCACAGCAATCCCAGATATTCTAACAACTTAA | 2567 | 0.4632 | MADTGGDDNGVTYLHGDLDLKIIEARHLPNMDIFSERLRRCVTGCDTIKFHSEDPAESGSQRTRQRHHRRIITSDPYVTVSVPQATVARTRVLKNSSDPLWNERFHIPLAHPVVDLEFRVKDDDVFGAQIIGTMKIPAQRIATGELISGWFPVVGPSGKPAKPDTALHVEMKFMSVEKNLLYKRGIAADPEQRGVRHTYFPVRKGSSVRLYQDAQCPETGGAKLPEVKLENGEVYRHGKCWEDICYAISEAHHMVYLVGWSIYHKVKLVREPTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKVFLKTTGVMQTHDEETRKFFKHSSVMCVLSPRYASSKMSFLKQQVVGTVFTHHQKCVIVDTQATGNNRKITAFIGGLDLCDGRYDTPEHRLFRDLDTVFSEDFHNPTFPAGTRAPRQPWHDLHCRIDGPAAYDVLINFEQRWKKATKWKEFAILFKKSSQWHDDALIRIERISWILSPSVTTKENYTVVPEDDPLVWVSREDDPENWHVQIFRSIDSGSLKGFPKHVDVALSQNLICAKSLVIEKSIQTAYIEAIRSAQHFIYIENQYFIGSSYAWPSYKDAGADNLIPMELALKIASKIRAKERFAVYVVLPMWPEGDPKTGAMQEILFWQGQTMQTMYNVVARELKAMQLSHINPQDYLNFYCLGNREDFSEESSSTSQEHINIADL*FMCMLRE*SLMMSML*LDLLI*TKDLWLVLKILR*LWVHINPITHGQQSKDIHMVRFMVTECHFGESILAC*MKLLGSQRVWSVCIQ*IKLLKTIGNYSLLKISRYCKDIFLSIL*R*ILMERLDPYRTVRIFPMLAVRY*VLTPQQSQIF*QL | 855 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vra11g0820 | 844 | PIRSF | PLD_plant | 5 | 727 | IPR011402 | GO:0004630|GO:0005509|GO:0016020|GO:0046470 | |
| Vra11g0820 | 844 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 359 | 394 | IPR001736 | GO:0003824 | |
| Vra11g0820 | 844 | Gene3D | Endonuclease Chain A | 227 | 478 | - | - | |
| Vra11g0820 | 844 | CDD | C2_plant_PLD | 10 | 174 | - | - | |
| Vra11g0820 | 844 | SUPERFAMILY | Phospholipase D/nuclease | 200 | 467 | - | - | |
| Vra11g0820 | 844 | SUPERFAMILY | Phospholipase D/nuclease | 553 | 653 | - | - | |
| Vra11g0820 | 844 | Pfam | Phospholipase D Active site motif | 359 | 394 | IPR001736 | GO:0003824 | |
| Vra11g0820 | 844 | Gene3D | C2 domain | 14 | 183 | IPR035892 | - | |
| Vra11g0820 | 844 | ProSiteProfiles | C2 domain profile. | 1 | 151 | IPR000008 | - | |
| Vra11g0820 | 844 | SMART | C2_3c | 17 | 150 | IPR000008 | - |
Showing 1 to 10 of 15 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vra11g0820 | K01115 | - | gmx:100814486 | 1259.59 |
Showing 1 to 1 of 1 entries