Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0816 ATGGGTGCAGTTGATGAGGATTATCTCAAGGAAATAGAGATAGCTCGACGTGAACTTCGTTCTTTCATCGCCAACAACAAATGCGCCCCTCTCATGCTTCAACTAGCGTGGAACGATGCTGCAACGTACGACGCCAGAAGCAGAACGGGAGGCCCCAATGCTTCTATTAGATTCATCACTAAACACGCAGCAATCAAGGAATTGGAAAAAGCAGTTCAAAACTGTGATATAGTGAAGCACAGACTTAAACTTAGGAAGGTTTCATACGCAGACCTTTACCAGCTTGCTGGTGTTGTTGCAATAGAGGTCACTCAGGGTCCAATTATTGAATTTGTTCCTGGCAGAAAGGATTCAAATGAATCTCCACGAGTTCAAGCAAACTTTCTAAATGGTGAAGAAGATGCAAGGAGTTTAAGGAGAAAATTTTCTCGCATGGGACTAAGTGAAGACAAAGACATAGTAGTTCTATGTGGAGGCCACGCTTTGATAAGAACTATGCATCCAAAAGTAGCAATGAGAGAGACACCTAAGGGTGAGACGCATGAAGATCGCAGCAGGTTCGAAGAAAGAAAATGGACAAAGGAACCTTTGAAGTTTGATAACTCCTATTTTAAGGAACTACTCAGTAAGGGTGCATCCTTTTCGAGGCTTCCCATGGACTCTGCTTTAGTAGAGGATCAAAGATTTTATCACTATGTTGAACGGTATGCTAAGGATGAGGATATCTTTTTCAAAGAATATGCAATTTCACATAAGAAACTCTCAGAGCTGGGCTTCGATCCCAAAAATCTAAACAAGTCCAAGGGACTATATCAGAAGCTAAATCAGCACAGGGGACTCGTAGGAATCGGTATAATATCAGTTGCGGTGGCCGGAATATTAGTTTACTTACATAAGATGAAGAAAAATCAATTGAAAGATTGA 924 0.4134 MGAVDEDYLKEIEIARRELRSFIANNKCAPLMLQLAWNDAATYDARSRTGGPNASIRFITKHAAIKELEKAVQNCDIVKHRLKLRKVSYADLYQLAGVVAIEVTQGPIIEFVPGRKDSNESPRVQANFLNGEEDARSLRRKFSRMGLSEDKDIVVLCGGHALIRTMHPKVAMRETPKGETHEDRSRFEERKWTKEPLKFDNSYFKELLSKGASFSRLPMDSALVEDQRFYHYVERYAKDEDIFFKEYAISHKKLSELGFDPKNLNKSKGLYQKLNQHRGLVGIGIISVAVAGILVYLHKMKKNQLKD* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0816 307 PRINTS Haem peroxidase superfamily signature 29 43 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra11g0816 307 PRINTS Haem peroxidase superfamily signature 87 104 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra11g0816 307 PRINTS Haem peroxidase superfamily signature 105 117 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra11g0816 307 PRINTS Haem peroxidase superfamily signature 152 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra11g0816 307 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra11g0816 307 ProSiteProfiles Plant heme peroxidase family profile. 29 273 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra11g0816 307 PANTHER L-ASCORBATE PEROXIDASE 5, PEROXISOMAL 3 300 - -
Vra11g0816 307 SUPERFAMILY Heme-dependent peroxidases 22 264 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vra11g0816 307 Gene3D Peroxidase, domain 2 129 251 - -
Vra11g0816 307 Gene3D - 15 258 - -
Vra11g0816 307 Pfam Peroxidase 19 239 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra11g0816 307 PRINTS Plant ascorbate peroxidase signature 8 28 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vra11g0816 307 PRINTS Plant ascorbate peroxidase signature 29 44 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vra11g0816 307 PRINTS Plant ascorbate peroxidase signature 47 57 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vra11g0816 307 PRINTS Plant ascorbate peroxidase signature 86 104 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vra11g0816 307 PRINTS Plant ascorbate peroxidase signature 105 117 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vra11g0816 307 PRINTS Plant ascorbate peroxidase signature 146 167 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vra11g0816 307 PRINTS Plant ascorbate peroxidase signature 220 244 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vra11g0816 307 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 3 300 IPR044831 GO:0004601|GO:0034599
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0816 Vra-Chr11 6755335 6758914 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0816 39 258 Peroxidase AT5G51890 27.935 1.14e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0816 K00434 - gmx:100813526 301.982