Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0807 ATGGAAGAGGTGTGGAAAGACATAAATCTTGCTACCTTAAATGACCAAGTCACACGCTCCACAACAACGCACTCCAACTTGGGAGGAGTAATCCTCCAAGACTTTCTCGCCAGACCCTTCACCATCGATCCACCAAACACCATTCTTTCCTCACAATCTCCCACCCTCTACGCCGCCCCCTCCTCACCGGCACCACCACTCCTCACGGCTCTCAGCTTGAGCTCACACCCCCACCTCCGTTTCGACCCTCACACGCAAAAACCCTCACACCCCCACCACCCTCCTCCACCCTCCAACCACTCTTGCTTCACCACCCCAACCACCGCCTCCTTAGGCGCCAAAAGATTCGCAGAACCCGATTGCAACCTCGGAGACAGAAGAAACAAGCGCATGATCAAGAACCGCGAGTCTGCTGCACGATCGCGAGCCAGGAAACAGGCTTACACGAATGAATTGGAGGTAGAAGTTGAGCAATTGAAGGAAGAGAATGCAAGGCTGAAAAGACAGCAAAAACAGCTGAGTGAAGTTGCAGCCAGTGAGCAAAAGAAGAAGGGTAGCCTATATCGAGCATCTACAGCTCCATTTTGA 588 0.5255 MEEVWKDINLATLNDQVTRSTTTHSNLGGVILQDFLARPFTIDPPNTILSSQSPTLYAAPSSPAPPLLTALSLSSHPHLRFDPHTQKPSHPHHPPPPSNHSCFTTPTTASLGAKRFAEPDCNLGDRRNKRMIKNRESAARSRARKQAYTNELEVEVEQLKEENARLKRQQKQLSEVAASEQKKKGSLYRASTAPF* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0807 195 Coils Coil 142 183 - -
Vra11g0807 195 MobiDBLite consensus disorder prediction 77 107 - -
Vra11g0807 195 CDD bZIP_plant_BZIP46 126 180 - -
Vra11g0807 195 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 195 IPR043452 GO:0003700|GO:0045893
Vra11g0807 195 PANTHER PROTEIN FD-LIKE 1 195 - -
Vra11g0807 195 MobiDBLite consensus disorder prediction 173 195 - -
Vra11g0807 195 Gene3D - 125 182 - -
Vra11g0807 195 SMART brlzneu 122 185 IPR004827 GO:0003700|GO:0006355
Vra11g0807 195 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 129 144 IPR004827 GO:0003700|GO:0006355
Vra11g0807 195 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 124 175 IPR004827 GO:0003700|GO:0006355
Vra11g0807 195 SUPERFAMILY Leucine zipper domain 126 175 IPR046347 GO:0003700|GO:0006355
Vra11g0807 195 Pfam bZIP transcription factor 126 178 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0807 Vra-Chr11 6665593 6667255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0807 1 146 bZIP Transcription Factor Family AT4G35900 37.931 1.35e-18 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vra11g0807 bZIP_1 7.6e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0807 K14432 - gmx:102660922 191.045