Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0801 ATGTCGAGGAGAAAGGTTAGAGAGCCAAAAGAAGAAAATGTGACTCTAGGTCCAGCTGTTAGAGACGGTGAACACGTCTTTGGCGTCGCTCGCATCTTTGCTTCCTTCAATGACACATTCATTCATGTCACTGACTTGTCTGGGAGGGAAACACTTGTTCGCATAACTGGTGGGATGAAGGTTAAAGCTGATAGAGATGAATCATCTCCCTATGCTGCTATGCTTGCAGCACAGGATGTTGCTGCCAGATGCAAGGAACTGGGCATAACTGCTCTTCATATCAGGCTCCGTGCCACTGGTGGAAACAAGACAAAGACACCTGGTCCTGGCGCTCAATCTGCTCTTAGAGCCCTTGCTCGTTCTGGAATGAAAATTGGTCGCATAGAGGATGTGACTCCCATTCCTTCCGACAGCACACGTAGAAAGAGTGGAAGGAGGGGTAGAAGGCTTTAA 453 0.4834 MSRRKVREPKEENVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAARCKELGITALHIRLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKSGRRGRRL* 151
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0801 150 PANTHER BNAA05G27530D PROTEIN 2 150 - -
Vra11g0801 150 Pfam Ribosomal protein S11 28 146 IPR001971 GO:0003735|GO:0005840|GO:0006412
Vra11g0801 150 Hamap 30S ribosomal protein S11 [rpsK]. 3 147 IPR001971 GO:0003735|GO:0005840|GO:0006412
Vra11g0801 150 Gene3D Ribosomal protein S11 1 150 IPR036967 GO:0003735|GO:0005840|GO:0006412
Vra11g0801 150 SUPERFAMILY Translational machinery components 23 148 - -
Vra11g0801 150 MobiDBLite consensus disorder prediction 130 150 - -
Vra11g0801 150 ProSitePatterns Ribosomal protein S11 signature. 115 137 IPR018102 -
Vra11g0801 150 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 2 150 IPR001971 GO:0003735|GO:0005840|GO:0006412
Vra11g0801 150 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 1 147 IPR001971 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vra11g0801 Vra-Chr11 6604457 6606501 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0801 1 139 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 89.928 3.08e-92 262
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0801 K02955 K01000 gmx:100306566 268.085