Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0800 ATGAAGTTTCTCTTCCAAAACCTTCTTTCTCATCTTCCTTTAATCATTCTTTGGTCTTTTGCCATTGTTACTCAACATACCAGTGTTGTGTTCAGTCTTCCAAACAATGAAACTGTGCCAGCAGTTATTGTCTTTGGAGACTCTATAGTAGATACAGGAAACAACAACTTCATCAACACCATTTTCAGATGCAATTTCCAACCATATGGTAAAGATTTTGGTGGAGGGAATCAACCAAGTGGGAGGTTCAGCAATGGTATAATCCCATCAGACATCATTGCTGCAAAATTTGGAGTAAAAAAGATTTTGCCACCTTATCTTGATCCAAAACTGCAACCTCAAGATCTCCTCACAGGTGTAAGCTTTGCATCTGGTGGTTCTGGATATGATCCTCTAACTTCTAAATCAGCATCCGTGTTATCACTGACAGATCAATTGAACAAGTTTAGGGAATACAAGAGCAAGATAGAGGAAATTGTTGGAGAAAATAGAACAGCAACAATAGTATCAAAAGGCATATACATATTGTGCACCGGAAGTAATGACATTGCCAATACTTACTCTTTCTCTCCAATTAGGCGTGCACATTATGACATTCCTGCATACACAGACTTAATGACTTCACAGGCCACAAACTTCTTGCAGGAACTTTATGGACTTGGAGCTAGAAGGATTGGAGTGATTGGTTTACCAGCTCTAGGGTGCGTGCCCTCGCAGAGAACAATTAAAGGAGGCTTACTGAGAAATTGTTCAGATTCTGAGAACCAAGCAACAATGCTCTTCAACACAAAACTCTCATCACAAATAGATGCACTGAGTAAAAAATTTCCAGAAGCTAGACTTGTCTACCTTGATATTTACAACCCTTTACTCAAAATGATTCAAAATCCTGCTAAATATGGTTTTGAAGTAGCAAACAAAGGGTGCTGTGGCACGGGAAATTTCGAAGCAGGCATACTTTGCAACAGTTTGACCCCACACATATGTTCAAATACCAAAAACTACATTTTTTGGGATAGTTTCCATCCTACGCAAGAGGCATATAATGTGCTCTGTTCTCTGGTGTTGGATAACAAAATCAAGAACTTCTTCTAA 1095 0.389 MKFLFQNLLSHLPLIILWSFAIVTQHTSVVFSLPNNETVPAVIVFGDSIVDTGNNNFINTIFRCNFQPYGKDFGGGNQPSGRFSNGIIPSDIIAAKFGVKKILPPYLDPKLQPQDLLTGVSFASGGSGYDPLTSKSASVLSLTDQLNKFREYKSKIEEIVGENRTATIVSKGIYILCTGSNDIANTYSFSPIRRAHYDIPAYTDLMTSQATNFLQELYGLGARRIGVIGLPALGCVPSQRTIKGGLLRNCSDSENQATMLFNTKLSSQIDALSKKFPEARLVYLDIYNPLLKMIQNPAKYGFEVANKGCCGTGNFEAGILCNSLTPHICSNTKNYIFWDSFHPTQEAYNVLCSLVLDNKIKNFF* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0800 364 PANTHER GDSL ESTERASE/LIPASE EXL3 2 363 - -
Vra11g0800 364 Pfam GDSL-like Lipase/Acylhydrolase 42 351 IPR001087 GO:0016788
Vra11g0800 364 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 42 53 IPR008265 GO:0006629|GO:0016298
Vra11g0800 364 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 2 363 - -
Vra11g0800 364 SUPERFAMILY SGNH hydrolase 173 356 - -
Vra11g0800 364 Gene3D SGNH hydrolase 30 360 IPR036514 -
Vra11g0800 364 CDD SGNH_plant_lipase_like 40 358 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0800 Vra-Chr11 6594289 6596429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0800 36 362 Pollen Coat Proteome AT1G75910 38.485 1.89e-73 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0800 - - gmx:100810354 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0800 11 6594289 6596429 Vra7g0158 7 2545757 2554234 PCT