Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0787 ATGGCATTTTCGGTGGCCCTGTTACCTCGTTGGTCGGTGTTTCTTCTTTTGCTTCTTTTCTTTTGTAGCACAGGAGCAAAGGTTGTCACCATTGATGTGCGCGCAGCCAGGGATCTTATCCAGACTGGTTCCATTTATCTTGATGTTAGGACGGTGGAAGAGTTCTCGAAAGGGTATGTAGATGCAGTTAATATCGTTAACATTCCATACATGTTGAATACACCTAAGGGCAAGGTAATGAATCCAGATTTTGTGAAAGAGGTTTCCTTGGCTTGTAACAAAGAAGATCATATCATTGTGGGTTGTCAAATTGGTGGGAGATCTTTCTATGCAACCGCTGCTCTTCTGTCAGATGGTTTTAAGAATGTGAAGGACATGGGAGGAGGTTATGAGGAATGGGTTATAAACAAGTTCCCAGTGAAGATACCAGCAGCCAAAGAGGAGTTATAA 450 0.4267 MAFSVALLPRWSVFLLLLLFFCSTGAKVVTIDVRAARDLIQTGSIYLDVRTVEEFSKGYVDAVNIVNIPYMLNTPKGKVMNPDFVKEVSLACNKEDHIIVGCQIGGRSFYATAALLSDGFKNVKDMGGGYEEWVINKFPVKIPAAKEEL* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0787 149 Gene3D - 22 142 IPR036873 -
Vra11g0787 149 PANTHER THIOSULFATE SULFURTRANSFERASE 18 16 148 - -
Vra11g0787 149 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 27 140 IPR036873 -
Vra11g0787 149 Pfam Rhodanese-like domain 37 134 IPR001763 -
Vra11g0787 149 SMART rhod_4 30 139 IPR001763 -
Vra11g0787 149 CDD RHOD 36 134 - -
Vra11g0787 149 PANTHER THIOSULFATE SULFURTRANSFERASE 18 16 148 IPR044684 GO:0003824
Vra11g0787 149 ProSiteProfiles Rhodanese domain profile. 45 142 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0787 Vra-Chr11 6487758 6489159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0787 27 140 Sulfurtransferasese or Rhodanese AT5G66170 51.754 5.63e-42 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0787 - K15692 gmx:100815122 220.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0787 11 6487758 6489159 Vra11g0787 11 6487758 6489159 ECH
Vra11g0787 11 6487758 6489159 Vra7g0148 7 2464930 2468320 PCT