Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0770 ATGGCCATCAAAAAATCCAATAAACTACCACAAGCTGTTGTTCTCAAGCAAATTGTCAAAAGATGCTCAAGTTTTGGCAAGAAGCAGACTTACAATGAAGAGGGTCTTCCTGATGATGTACCAAAAGGCCATTTTGCTGTCTATGTTGGGGAGAACAGAACCAGATACATTATCCCAATCTCATGGCTGGCTTATCCACAGTTTCAAAGCCTGCTCCAAAGAGCCGAGGAGGAGTTTGGCTTCAACCATGACATGGGACTTACCATACCCTGTGATGAAGTTGCATTTCAGTCCTTAACCTCCATGATGAGATAG 315 0.4317 MAIKKSNKLPQAVVLKQIVKRCSSFGKKQTYNEEGLPDDVPKGHFAVYVGENRTRYIIPISWLAYPQFQSLLQRAEEEFGFNHDMGLTIPCDEVAFQSLTSMMR* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0770 104 Pfam Auxin responsive protein 27 103 IPR003676 GO:0009733
Vra11g0770 104 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 104 IPR003676 GO:0009733
Vra11g0770 104 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0770 Vra-Chr11 6276827 6277573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0770 5 103 Calmodulin-binding Proteins AT4G34750 39.394 5.06e-20 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0770 K14488 - gmx:100798840 209.149