Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0765 ATGTACTTCCATTTAGAACATAATCAACTTGGTTCTCATTTTGAGGGATCTCTAAAAGTGTGTAACAGGACACGGGCATTTGACATCGATCAAATGCATAATCTATCTGAATTCTCTTTGGTAAAAATTTTCTCATCTGAGGAATGTCCTGCAAAAATTGGAAACAAATGTGAAGATGATTTTCAAGGAAAGACATTGTCCACAAGGTCTTCAACCCTTGAATATGATGATTTCCCACCTGGATTTGAAGGCAATCATTTCCAGAATCAATCAAAGTCAGAATTTTCTTACATTAAATGGGACTGCCCTCCTCCGCTTGTTCTGAATCGTCGTTGGAGCGTGGCAGCTGGTGAAGAAAGTACGGAGAAATATGATGAGATGCTAAGAGAAAGGAGAGTGTCTGAAGCATATTATCCTTGTAGTTCTGCCATTCCTCCAAGCCCTTTTGTTTCATTTAACGTGGAGAGTGAAAGCTATGATGATTGTCTTACTCCTATCATCTCTCTCATTCCCATTGAGGAATATGAATCAGTAACAGGTATTAACCATGATGTTTCTGTCACAAAAAAACAAGGAGACTCTCTCTCCAAACTGCAGACACAAACCACAAAGCAATGCATTCCACCAGCAACAACATCTTCGGAGGCAAATTTCGTTACAGCTTCTATCACTACTGTTTTATCTACCATCTTAAAAAGCATCGAAGAAGGAACCGTGATTGATGTTGATTTTCTCTTTAAAATAGCTAATGACCCAATAATGATTGAGAAAATAATGGAAGAATATTCAACTGTTACCACCACTGGGATGAATACACCCTCAAGGACTGCGAGTGCAAGAAAATCATCAGCTCCATCAAATTCACCGATGATCGTCGCCTCTGAAATGTCTGAAATTCCATCTAGTTCATTGCTGGCATCTGTACATGATAATCATGTAACTGCAACTGCACTTGTTCCTTTGTCTGCATCTGTATCTGCTCACACAGCTGCACTTCATGTGCACATGCCAGTGAAAGATGTCAATTACCATAAAAACCTTGTTAGAAAATATGATGGTATGAGTCAGCCAGACATGCAGAATCATAATCATTTGCAATATTATAAACGACCGCGTGTCCGTAATCCAAATGAAGTGAGAAGGAAAATTCAGAAATCGTCCAAATACTATAAGACTTCAAGGGGTTGTCACCGTGGTTCCAAATGCCGTTATGTGCATGATAAGGTGTGGAAAATGTAA 1239 0.3906 MYFHLEHNQLGSHFEGSLKVCNRTRAFDIDQMHNLSEFSLVKIFSSEECPAKIGNKCEDDFQGKTLSTRSSTLEYDDFPPGFEGNHFQNQSKSEFSYIKWDCPPPLVLNRRWSVAAGEESTEKYDEMLRERRVSEAYYPCSSAIPPSPFVSFNVESESYDDCLTPIISLIPIEEYESVTGINHDVSVTKKQGDSLSKLQTQTTKQCIPPATTSSEANFVTASITTVLSTILKSIEEGTVIDVDFLFKIANDPIMIEKIMEEYSTVTTTGMNTPSRTASARKSSAPSNSPMIVASEMSEIPSSSLLASVHDNHVTATALVPLSASVSAHTAALHVHMPVKDVNYHKNLVRKYDGMSQPDMQNHNHLQYYKRPRVRNPNEVRRKIQKSSKYYKTSRGCHRGSKCRYVHDKVWKM* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0765 412 MobiDBLite consensus disorder prediction 267 288 - -
Vra11g0765 412 ProSiteProfiles Zinc finger C3H1-type profile. 381 409 IPR000571 GO:0046872
Vra11g0765 412 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 37 408 - -
Vra11g0765 412 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED 37 408 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Vra11g0765 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0765 - - vra:106776671 830.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0765 11 6238349 6241319 Vra7g0121 7 2173776 2180992 PCT