Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0761 ATGATGGAGTCGATGGAGTCATGTGTCCCACCTGGGTTTCGGTTCCACCCAACAGATGAAGAGCTTGTTGGTTACTATCTGAGGAAGAAGGTGGCTTCTCAAAAGATTGACCTTGACGTTATCAGAGAGATCGATTTATATCGTATTGAACCATGGGATCTTCAAGATAGATGCAGGATCGGGTATGAAGAGCAGAATGAGTGGTATTTCTTCAGCCACAAAGATAAAAAGTATCCAACAGGGACAAGAACTAATAGAGCTACCATGGCGGGGTTTTGGAAGGCTACAGGAAGAGACAAAGCAGTGTATGACAAGGCAAAACTAATTGGGATGAGAAAAACCCTTGTTTTCTACAAAGGAAGAGCCCCTAATGGGCAAAAGTCTGATTGGATCATGCACGAGTATAGACTCGAATCCGACGAGAATGGACCTCCACAGGAGGAAGGATGGGTTGTGTGCAGAGCCTTCAAGAAAAAAACCACTGGACAGACAAAGACTATTGAAGGATGGGACTCAAGCTACTTCTTCGAGGAAGGAAGTGGTGTAAGCACGGTGGCTGATCCAATCGATCTCATTTCAAGGCAGTCTCAGAGCTTTTTATCTCAAAATTTCTTGTGTAAGCAAGAGATAGAAGCGGATAACTTGAGTTGCATGCTTCAAGATCCATTTGTACAACTTCCTCAGCTAGAAAGCCCGTCTTTGCCATTAGTGAAGAGGCCAAGCACAGTGTCACTGGTATCAGACAATAACGAAGACGAAGACATTCAAAACAGGTTATCCAACAACAACACAAAGAAAGTCACTGATTGGAGAGCTCTTGACAAGTTTGTAGCCTCTCAACTGAGTCAAGAAGACACGCTTGAAACCAATGGTCTCTCAAGCTTTGAACCTCATGATAGCCACGACATGGCACTGCTGTTACTGCAGAGCAGTAGAGATGAAGGGAACAGGCTAAGTCCTTTTCTAAACACAAACTCAGACTGTGATATTGGGATATGCGTGTTTGAAAAATGA 1014 0.4379 MMESMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQDRCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKAKLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLESDENGPPQEEGWVVCRAFKKKTTGQTKTIEGWDSSYFFEEGSGVSTVADPIDLISRQSQSFLSQNFLCKQEIEADNLSCMLQDPFVQLPQLESPSLPLVKRPSTVSLVSDNNEDEDIQNRLSNNNTKKVTDWRALDKFVASQLSQEDTLETNGLSSFEPHDSHDMALLLLQSSRDEGNRLSPFLNTNSDCDIGICVFEK* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0761 337 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 316 - -
Vra11g0761 337 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
Vra11g0761 337 ProSiteProfiles NAC domain profile. 9 158 IPR003441 GO:0003677|GO:0006355
Vra11g0761 337 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
Vra11g0761 337 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Vra11g0761 337 PANTHER NAC DOMAIN-CONTAINING PROTEIN 76 5 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0761 Vra-Chr11 6200155 6204459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0761 2 336 NAC Transcription Factor Family AT2G18060 65.217 2.93e-165 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vra11g0761 NAM 5.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0761 - - pvu:PHAVU_002G110900g 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0761 11 6200155 6204459 Vra11g0761 11 6200155 6204459 ECH
Vra11g0761 11 6200155 6204459 Vra7g0119 7 2147960 2151502 PCT