Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0750 ATGGATTGGTTCCTAAAATCATCGGAAGCCATGTCCAACCTTAATCCATTCAACATCGCCATCTTACTCATCCTCCCACTAACAACACTTCTCTTCGTTTTGCTACATCGTACTCGTCGAAGAGCACCGTATCCGCCGGGACCAAAGGGCTTGCCCATCATAGGAAACATGCTGATGATGGACCAGTTAACCCACCGCGGTCTCGCCACCCTGGCCAAGCAATACGGCGGCGTTTTCCACCTCCGCATGGGCTTCCTCCACATGATCGGCATCTCCGACCCCGACGCGGCGCGTCAGGTTCTCCAAGTCCAAGATAATATCTTCTCCAATCGCCCCGCCACCATCGCCATCAGCTACCTCACCTACGACCGCGCTGACATGGCCTTCGCACACTACGGTCCCTTCTGGCGCCAGATGCGCAAACTCTGCGTCATGAAACTCTTCAGCCGAAAGCGCGCCGAGTCCTGGCAATCCGTGCGGGACGAGGTCGATGCTGCAGTCCGCTCCGTCGCGGCTTCCGCCGGAAAAGCCGTCAACGTCGGCGAGCTCGTTTTCAACCTGACGAAAAACATCATCTACCGCGCGGCCTTTGGGTCGAGCTCGCAGGAGGGGCAGGACGAGTTCATTGGGATTCTGCAGGAGTTTTCGAAACTCTTTGGCGCTTTCAACATCGCGGATTTTATACCCTACCTCGGGCGCGTGGACCCGCAGGGGCTCAACGCGCGCCTTGCTAGGGCTCGCGGCGCGTTGGATAGCTTCATTGATAAGATCATTGATGAGCACGTAGAGAAGAAGAAGAATGAGAAGGGTGTCTGTGATGGAGAAACGGACATGGTGGATGAGTTGCTCGCGTTCTACACCGAAGAGGCCAAGTTGAACAATGAACCCGAAGATTTGCAGAACCCTATCAGACTCACTAAGGATAACATCAAAGCTATCATTATGGATGTGATGTTTGGAGGGACGGAAACCGTGGCATCGGCGATTGAGTGGGCCATGGCGGAGCTAATGAGAAGCCCAGAAGACCAAAAGAGGGTCCAACGGGAGCTCGCGGATGTAGTGGGCCTGGACCGTCGGGTCGAAGAGTCCGATTTTGAGAAACTCACATTCTTAAAATGTGCCCTTAAAGAGACCCTACGCCTCCACCCTCCGATCCCGCTCCTCCTCCACGAGACGGCCGAGGAAGCGACGGTCAGCGGCTACTTCGTTCCCAAGAAAGCGCGCGTGATGATCAACGCGTGGGCAATTGGGAGAGACGAAAACTCTTGGGAGGAACCCGAAACATTCAAACCCGCCAGGTTTTTGGAACCGGGCGTGCCCGACTTCAAGGGTAGCAACTTCGAGTTCATTCCTTTCGGGTCGGGTCGCAGGTCCTGCCCCGGTATGCAGTTGGGGCTGTACGCGCTTGAATTGGCGGTGGCTCACCTCCTTCACTGCTTCACGTGGGAATTGCCAGATGGAATGAAACCCAGTGAGTTGGACATGGGTGACATTTTCGGACTCACCGCTCCAAAAGCCACGCGACTCATCGCCGTGCCAACCAAGCGCGTGGTGTGCCCTCTCTTTTAA 1569 0.5564 MDWFLKSSEAMSNLNPFNIAILLILPLTTLLFVLLHRTRRRAPYPPGPKGLPIIGNMLMMDQLTHRGLATLAKQYGGVFHLRMGFLHMIGISDPDAARQVLQVQDNIFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWQSVRDEVDAAVRSVAASAGKAVNVGELVFNLTKNIIYRAAFGSSSQEGQDEFIGILQEFSKLFGAFNIADFIPYLGRVDPQGLNARLARARGALDSFIDKIIDEHVEKKKNEKGVCDGETDMVDELLAFYTEEAKLNNEPEDLQNPIRLTKDNIKAIIMDVMFGGTETVASAIEWAMAELMRSPEDQKRVQRELADVVGLDRRVEESDFEKLTFLKCALKETLRLHPPIPLLLHETAEEATVSGYFVPKKARVMINAWAIGRDENSWEEPETFKPARFLEPGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALELAVAHLLHCFTWELPDGMKPSELDMGDIFGLTAPKATRLIAVPTKRVVCPLF* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0750 522 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0750 522 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0750 522 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0750 522 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0750 522 Pfam Cytochrome P450 45 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0750 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Vra11g0750 522 Gene3D Cytochrome P450 37 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0750 522 SUPERFAMILY Cytochrome P450 37 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0750 522 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 8 522 - -
Vra11g0750 522 PANTHER CYTOCHROME P450 84A1-RELATED 8 522 - -
Vra11g0750 522 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0750 522 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0750 522 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0750 522 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0750 522 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0750 522 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0750 522 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0750 522 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0750 522 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0750 Vra-Chr11 6085677 6089523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0750 52 521 Monolignol Biosynthesis Gene Families AT4G36220 77.801 0.0 781
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0750 K09755 - gmx:100793538 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0750 11 6085677 6089523 Vra11g0750 11 6085677 6089523 ECH
Vra11g0750 11 6085677 6089523 Vra7g0110 7 2038365 2041723 PCT