Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0742 ATGGAATGGATCATAGGAGTGTGTGTTGTGATGGGCATGTTGTTGATGAGTTGGTGGATTCTACTGTATGGGAAGAATGATGAGAAGACTGTGGGAAAAGGCAAAGTCCCAAAAGGAAACTCTGGTTGGCCTTTACTCGGAGAGACCCTTGATTTCATAGCTTCTGGCTACACTTCTTCCCCTGTCACCTTCTTCGAAAAACGCAAGTCTTTGTACGGGAATGTGTTCAAGACATGCATTTTGGGGAGCAATGTCATAATATCGACTGACCCGGACGTCAACAAGGTGGTTCTGCAGAACCACCAAGGCAACTTCGTCCCTGCTTATCCAAAATCAATTAGAGAATTGATGGGAGAACAATCCATACTCAAAATGAACGGGACCATGCATAAGAAAGTGCACACTCTCATCGCAGGGTTCCTCCGATCCCCACAACTCAAAGCTCGAATCACCAGAGACATTGAACACACTGTCAAACAATGCTTGGCATCTTGGACTTCCCACCAAACAATATACGTTCAAGATCAAGTCAAAAGGATTACATTTCCTGTTTTGGTCAAAGTTCTGATGAGCGTTGGTCCTGGTGAAGAATTGGACTTCCTGTATAGAGAGTTTGCAGAATTCATCAAAGGGTTGATTTGCTTACCCCTCAAATTTCCCGGAACAAGACTATATAAATCCTTGAAGTCGAAAGATAGGATGGTGAAGATGGTGAGGAAGATAGTAGAGGAGAGGAAGAAGCTAATGATAGATAATGATGCAGATGACGAAGGTGATGCAGTGAATGATGTATTGGAGGCACTGTTACGAGATAAGGGTGACTCCAGCTCAAGCGCACGCCTGAGTCCAGACATGATTAGCCAAAACATCATAGAGATGATGATACCAGGGGAGGAAACACTTCCTACAGCTATGACCATGGCCCTCAAGTTCCTCAGTGACTCTCCTATCGCTTTATCTAAACTTAAGGAGGAGAACATGGAACTGAAGAGACTAAAGACTAATTGCTCAGAAGATTATGCATGGACTGATTACATGTCACTGCCATTTACTCAAAATGTTATCAGTGAAACTCTCAGAATGGCCAATATTGTCAATGGCATTTGGAGGAAATCGCTCAATGACATAGAAATTAAAGGGTACCTGATTCCGAAGGACTGGTGTGTCATGGCATCTCTTACCTCGGTTCACATGGACGAGAAGAACTATGAAAACCCTTTTAAATTCGATCCATGCAGATGGGAGAAAATTGGAGCTGTGGCTGGTTGCAACAGCTTTGCCCCATTTGGCGGTGGAAATAGACTATGTCCTGGATTAGAACTCTCCAGGCTCGAGCTCTCTATTTTCCTTCATCATCTTGTTACTACTTACAGGTGGATGGCTGAGAGGGATGAAATCGTCTACTTTCCAACTGTGAAGATGAAGAGGAAGCTCCCAATTTGCGTGCAACCCATTAACGCTTGA 1464 0.4385 MEWIIGVCVVMGMLLMSWWILLYGKNDEKTVGKGKVPKGNSGWPLLGETLDFIASGYTSSPVTFFEKRKSLYGNVFKTCILGSNVIISTDPDVNKVVLQNHQGNFVPAYPKSIRELMGEQSILKMNGTMHKKVHTLIAGFLRSPQLKARITRDIEHTVKQCLASWTSHQTIYVQDQVKRITFPVLVKVLMSVGPGEELDFLYREFAEFIKGLICLPLKFPGTRLYKSLKSKDRMVKMVRKIVEERKKLMIDNDADDEGDAVNDVLEALLRDKGDSSSSARLSPDMISQNIIEMMIPGEETLPTAMTMALKFLSDSPIALSKLKEENMELKRLKTNCSEDYAWTDYMSLPFTQNVISETLRMANIVNGIWRKSLNDIEIKGYLIPKDWCVMASLTSVHMDEKNYENPFKFDPCRWEKIGAVAGCNSFAPFGGGNRLCPGLELSRLELSIFLHHLVTTYRWMAERDEIVYFPTVKMKRKLPICVQPINA* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0742 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Vra11g0742 487 Pfam Cytochrome P450 37 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0742 487 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90C1 8 482 - -
Vra11g0742 487 Coils Coil 319 339 - -
Vra11g0742 487 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0742 487 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0742 487 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0742 487 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0742 487 PRINTS E-class P450 group IV signature 63 86 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0742 487 PRINTS E-class P450 group IV signature 348 364 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0742 487 PRINTS E-class P450 group IV signature 397 415 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0742 487 PRINTS E-class P450 group IV signature 420 436 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0742 487 PRINTS E-class P450 group IV signature 436 454 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0742 487 Gene3D Cytochrome P450 26 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0742 487 SUPERFAMILY Cytochrome P450 34 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0742 487 PANTHER CYTOCHROME P450 26 8 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0742 Vra-Chr11 5996107 6001542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0742 36 380 Cytochrome P450 AT4G36380 63.768 1.21e-160 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0742 K12637 - gmx:100799030 887.1