Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0736 ATGATGCCGGAACGAGCTAATCTGCACATAGCCTTAACCTTTTTGCAATTTTGTTATGCAGGAAATCATATATTTGTGAGCATTGCACTTGATACAGGAGTAAGCAAGCTTATATTTGCTCTCTATAGAAACATCATCGCCTTGGTTCTTCTGGGTCCACTCGCGTATTTTTCAGAGAAGAAAGATAGGCCATCAATAACCACTTACTGTGTGGTACACTTTTTCCTACTTGGACTTGTTGGAATAACAATGAAAGAAGGATTCTACCTCTTGGGTTTGGAGAAAACTTCACCTACGTTTGCCGCTACTATGCAGAATTCAGTTCCTGCCCTCACTTTTCTGATGGCTGCACTACTCAGATATGAGAGCGTTCACTTCAATAGAATTGATGGTGTGGCTAAGGTCCTTGGTGTCCTTGCTTCTGTCGGTGGAGCTACAGTCATTACCCTTTACAAGGGACCTGTTATTTATTCTCCGCGTTTAGGATATAATCAGGAACAATACTTGTCTATGATGGGGGATACCCCAGGAAAGAACTGGAACTTGGGTGGCATCTATCTCTTCAGTCACTCCTTAAGTTGGTCTGGTTGGATTGTGATGCAAGCATTTGTTCTGAAAAGATACTCAGCCCCGCTCACAGTTTCTGCATTTACGTGCTTCTTTGGTGTTGTGCAGTTTTTGACAATTGCAGCTTTTTTTGAGAAGGATTCCAAAGCCTGGCAGTTCAATTCTAGTACAGAAATCTACAGTGTTTTGTTTTCGGGAGTGGTGACTTCAGGGCTGGCATCAGCAATACAGATATGGACTATTGGCAAAGGAGGGCCAGTTCTTGCTTCAATTTATCTACCTTTACAAACATTGCTAGTAGCTGTGATGGCATCTATTATTTTCGGTGAAAAATTCTTCTTGGGAGGGATTATTGGAGCATTCTTAATCATATTGGGTTTGTATCTTGTTGTATGGGGAAGAAGTCAAGAAACCAAGACTATCAAAGAGGTCATAGTCCCCCTTGATTCCAAGAATCACTGGGAAGAAAGGAGTGACGCTTTTTCTCTTAAACAACCATTGATTACTGCACAAAGCTCTTAG 1089 0.416 MMPERANLHIALTFLQFCYAGNHIFVSIALDTGVSKLIFALYRNIIALVLLGPLAYFSEKKDRPSITTYCVVHFFLLGLVGITMKEGFYLLGLEKTSPTFAATMQNSVPALTFLMAALLRYESVHFNRIDGVAKVLGVLASVGGATVITLYKGPVIYSPRLGYNQEQYLSMMGDTPGKNWNLGGIYLFSHSLSWSGWIVMQAFVLKRYSAPLTVSAFTCFFGVVQFLTIAAFFEKDSKAWQFNSSTEIYSVLFSGVVTSGLASAIQIWTIGKGGPVLASIYLPLQTLLVAVMASIIFGEKFFLGGIIGAFLIILGLYLVVWGRSQETKTIKEVIVPLDSKNHWEERSDAFSLKQPLITAQSS* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0736 362 Pfam EamA-like transporter family 183 320 IPR000620 GO:0016020|GO:0016021
Vra11g0736 362 Pfam EamA-like transporter family 17 147 IPR000620 GO:0016020|GO:0016021
Vra11g0736 362 PANTHER WAT1-RELATED PROTEIN 5 332 - -
Vra11g0736 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 227 324 - -
Vra11g0736 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 136 - -
Vra11g0736 362 PANTHER WAT1-RELATED PROTEIN 5 332 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0736 Vra-Chr11 5952500 5954988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0736 2 347 Nodulin-like Gene Family AT1G75500 56.374 6.25e-140 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0736 - - gmx:100790386 626.32