Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0674 ATGAAACAAGCAGCTGCAAAGTCATCCCTTAGGAGGCTTTGTCCGAACATCGATAGAGAAGATGGGTTGGAGACCGTTCTTGAAATTCCAATACCCGAAGAAATGTTCACACCCATGGGAAGCAACGTAACATTGCGGTGGCAAAACATGTTAACGTGGATGAAGGCTCAAACAGAAGACAAATTATCCACCCCTACAGTTTCAGCGCGCTTAAATGAGCTTCGCTTTCTGCTTTACCTCGTTGGCTCTCCTCTTATCCCTCTTCAGGTCCAATTAGGTCATTCCGTCCGTCGTCCGGTCAGAGATTGTTCTATTGAAGCATCAACGGCAAAGTATATAGTACAACAGTATATAGCGGCAACGGGAGGACAGCCGGCATTGAATGCGGTGGATAGTATGTGTGTTCTTGGGCAGATAAAGATTGTTGCGTCAGATTTTCACCAGACTTGTGAAACCATTGAGGTGAAGAAAACCTCGGAAGAGATGGGAGGGTTCGTTTTGTTGCAAAAGGATCCCGATTTGTGGTGTTTAGAGATTCTTGTGTCAGGGTGCAAGGTTTCTTGCGGTAGCAATGGCAAGGTCTCTTGGCGCCATTCCTCTAACCAGCAGACACCAATTTCAAGAGGTGCTCCTAGACCTCTACGTCGTTTTCTTCAGGGATTGGATCCAAGGGCAACGGCTAACTTATTTTTGGACGCTGCATGCATAGGAGAGAAAATAATCAATGATGAAGAGTGCTTCATCTTGAAATTGGAAACAAGTCCAGCAATTCGTGATGCCCAAAGCGGACCAAACTTTGAGATTATCCACCACACGATATGGGGCTATTTTAGCCAGCGATCTGGTCTCTTAGTTCAGTTCGAAGATTCAAGATTACTCACGATGAGAACCAAAGAGGACAACGACATTTTTTGGGAAACAAGTTTAGAATCAGTAATTGAGGATTACAGGTACGTAGATGGGATAAACGTATCACACAGTGGGAAGACTCGAGTTACAGTTTCCAGATACGGTGAACAATCAGCTAACCATAAAAGAGAATTGGAAGAGAGATGGAAGATCGAAGAGGTAGATTTTAATGTCTGGGGTTTGAATGCTGAAAGCTTTCTACCTCCTTCAAACTTAGGAAAGACATAA 1137 0.4415 MKQAAAKSSLRRLCPNIDREDGLETVLEIPIPEEMFTPMGSNVTLRWQNMLTWMKAQTEDKLSTPTVSARLNELRFLLYLVGSPLIPLQVQLGHSVRRPVRDCSIEASTAKYIVQQYIAATGGQPALNAVDSMCVLGQIKIVASDFHQTCETIEVKKTSEEMGGFVLLQKDPDLWCLEILVSGCKVSCGSNGKVSWRHSSNQQTPISRGAPRPLRRFLQGLDPRATANLFLDAACIGEKIINDEECFILKLETSPAIRDAQSGPNFEIIHHTIWGYFSQRSGLLVQFEDSRLLTMRTKEDNDIFWETSLESVIEDYRYVDGINVSHSGKTRVTVSRYGEQSANHKRELEERWKIEEVDFNVWGLNAESFLPPSNLGKT* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0674 378 PANTHER LIPASE 10 368 IPR006873 -
Vra11g0674 378 Pfam Protein of unknown function (DUF620) 133 372 IPR006873 -
Vra11g0674 378 PANTHER BNAC02G43970D PROTEIN 10 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0674 Vra-Chr11 5394306 5396108 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0674 - - gmx:102664990 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0674 11 5394306 5396108 Vra11g0674 11 5394306 5396108 ECH
Vra2g0408 2 3175846 3178555 Vra11g0674 11 5394306 5396108 ECH