Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0640 ATGGAAACTCAAACCTGCATCTTTGTTATTGCCTTCTCCCTAATCTTTCTATTGAATTGGTTTGCAAAACATTACAAGAATAAATCTCATGTCTCTCTCAAACTACCCCCAGGCCCAAAGAGGCTACCAATCATAGGAAACCTTCATCAACTAGCAGTAGCAGGTTCACTTCCACACCGTGCTCTCCAAAATCTTTCCCATAAATATGGACCTCTCATGCACCTTCAACTTGGTGAGATTTCTGCAGTGGTTGCATCCTCCCCGGAGATGGCCAAGGAAATAACCAAAACACATGATGTCGCTTTTGTGCAAAGGCCTCAGTTTATTTCTGGACAAATTTTGTCCTACGGGGGCATAGATGTTGTTTTCGCTCCATATGGTGATTACTGGAGACAAATGAGGAAAATATTTGTCTCAGAACTTCTAAGTACCAAGAGAGTTCAGTCTTTCTCTTTTATTAGAGAAGATGAGACGGAAAAACTTATAGACTCGATTCGAAGATCAGCAGGTTCACCAATCAATCTTACTGGCAGAATTTTCTCGTTGGTAAGCACTACTGTTTCCAGGGCAGCATTTGGTAACAAATCAAAGGACCAGGATGAATTTCTACTTTTGATTAAGAAAGTAATAGGATCGGTTGGAGGATTTGACCTTGCTGATTTGTTCCCTTCTATGAAATCCATACATTTCATAACTGGGAAGAAGGCCAAATTGGAGAAGCTGCTGAATCAGGTTGACAGGGTCTTGGAAAATATTGTCAAAGAGCATCAAGAAAAGCAAAGAAGAGCGGAAGAAGGGAGAGCTCAAATAAAGGACGAAGATCTTGTTGATGTTCTTCTCGGATTCCAACAAGCCGACGCTGCTCTCGATATCAAAATCACCACTAGGAACGTCAAAGCTTTGATATTGGACGTATTTGCTGGTGGCGTTGATACTTCTGCATCAACAATAGAGTGGGCAATGACAGAAATGATGCGAAGTCCAAGAGTGATGAAGAAAGCACAAGCTGAGTTGAGAGAAGCCTTAAGAGAGAAGGAAATGATCCATGAAAGGGATCTAGAGCAACTTAGTTATTTGAAGTTGGTGGTCAAAGAGACATTGAGGCTACACCCACCAACTCCATTGTTGATCCCTAGAGAATGCTCTGAACGAACCATGATCGATGGGTATGAAATACCTGTGAAAACTAAAGTGATGATAAACGTATGGGCAATTTGCAGGGATCCGAAATACTGGAATGATGCAGAGATGTTTGTCCCAGAAAGGTTTGAAGGAAGTAGTATCGATTTCAAAGGGAATAACTTCGAGTATCTGCCATTTGGAGCAGGAAGGAGAATATGCCCTGGAATCTCGTTTGGTTTAGCAGGTATCATGCTTCCACTGGCTCGATTACTTTATCATTTCAACTGGGAACTTCCAAATGGCATGACACCTGAGAGTATAGACACGGTTGAACGCTTTGGAATGGCCATTGGTAGGAAAAACGAATTGTGTTTGATCCCCATTGTTTATGATCCTTGA 1521 0.4168 METQTCIFVIAFSLIFLLNWFAKHYKNKSHVSLKLPPGPKRLPIIGNLHQLAVAGSLPHRALQNLSHKYGPLMHLQLGEISAVVASSPEMAKEITKTHDVAFVQRPQFISGQILSYGGIDVVFAPYGDYWRQMRKIFVSELLSTKRVQSFSFIREDETEKLIDSIRRSAGSPINLTGRIFSLVSTTVSRAAFGNKSKDQDEFLLLIKKVIGSVGGFDLADLFPSMKSIHFITGKKAKLEKLLNQVDRVLENIVKEHQEKQRRAEEGRAQIKDEDLVDVLLGFQQADAALDIKITTRNVKALILDVFAGGVDTSASTIEWAMTEMMRSPRVMKKAQAELREALREKEMIHERDLEQLSYLKLVVKETLRLHPPTPLLIPRECSERTMIDGYEIPVKTKVMINVWAICRDPKYWNDAEMFVPERFEGSSIDFKGNNFEYLPFGAGRRICPGISFGLAGIMLPLARLLYHFNWELPNGMTPESIDTVERFGMAIGRKNELCLIPIVYDP* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0640 506 Pfam Cytochrome P450 36 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0640 506 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0640 506 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0640 506 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0640 506 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0640 506 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0640 506 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0640 506 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0640 506 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0640 506 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0640 506 Coils Coil 331 351 - -
Vra11g0640 506 Coils Coil 231 273 - -
Vra11g0640 506 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0640 506 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0640 506 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0640 506 Gene3D Cytochrome P450 28 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0640 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Vra11g0640 506 SUPERFAMILY Cytochrome P450 36 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0640 506 PANTHER CYTOCHROME P450 71D8 3 505 - -
Vra11g0640 506 PANTHER OS08G0105600 PROTEIN 3 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0640 Vra-Chr11 5107659 5109799 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0640 12 506 Cytochrome P450 AT3G26300 43.366 9.50e-145 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0640 - K15472 gmx:100785715 817.379