Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0621 ATGGATGCTTTTGTGCTTAAAACACTTATTTCAGGCATTGTTGCCCTGTTAGTGTGGCCTTTGTTTTATCAATTTAAGAAAACACTTGGCGGCAATAGAAAGATCTGTAGTGCACCTCAAGCAGCAGGTGCATGGCCTATTATTGGCCATTTGCATCTCTTCGGGAGTCATCAACTTACGCACAAAACACTTGGGGTGATGGCTGAGAAACATGGACCAATTTTCACAATAAAGCTTGGTTCATACAAAGTTCTGGTCTTGAGTAGCTGGGAGATGGCCAAAGAGTGTTTTACTGTCCATGACAAAGCATTCTCGACCAGGCCCTGTGTTGCAGCCTCAAAGCTAATGGGCTACAACTATGCCATGTTTGGCTTCACTCCTTATGGTCCTTACTGGCTTCAAGTACGGAAGCTAACGACCATTGAGCTTCTGTCTAACAATCGGCTTGAGCCCCTCAAAAACACAAGAACGTTTGAGTTAGATGCTGCAATAAGGGGGCTCTACCGGTTATGGTCAAAAGAAGGGTGTCCGGAGGGAGGAGTTTTGGTAGATATGAAGCAGTGGTTTGGAGATTTGACACATAATATTGCTATCAGAATGGTGGGAGGGAAGCCGTATTGTGGGGTTGGCGATGGTTATGCGGATGGTGAAGCAAGAAGGTATAGGAGAGCTATGAGGGACTGTGTATGTTTGTTTGGGGCGTTTGTGCTGTCTGATGCATTTCCATTTCTGAGGTGGCTAGATATCAATGGATATGAAAAGGATATGAAGAGAACTGCTAGTGAATTGGACACTCTAGTTGAAGGTTGGCTAGAGGAACACAAAAGGAAAAGAGCTTTGAATGTGAATGGAAAGGAAGAACGGGATGATTTCATGGATGTCTTGCTGAATGTTCTGCAGGGCACAGAGATTTCTGGTTATGATTCAGATACCATCATCAAGGCCACTTGCCTGAATTTGATTTTAGCAGGAACTGACCCCACCATGGTCACGCTAACATGGGTGCTGTCTCTGCTACTTAACCATCCAACGGAACTTAAACGAACCCAACATGAACTGGACACTCTTATTGGGAAGGAAAGGAAAGTTGAAGAATCTGACATAAAGAAGCTGGTGTACCTCCAAGCCGTTGTGAAGGAAACTCTGCGCCTATATCCACCCAGTCCCATTATCACCCTTCGAGCAGCCATGGAAGACTGCACCTTTTCATGCGGCTATCACATTCCTGCGGGCACACAATTAATGGTGAATGCTTGGAAGATCCATCGGGATGGTCGTGTTTGGAGTGACCCTCACGATTTCAAGCCTGAAAGGTTCTTGACAAGCCACAAAGATGTTGATGTAAAGGGTCAAAACTATGAGCTCGTCCCTTTTAGTTCTGGAAGGCGGGCATGCCCAGGTGCCTCACTAGCTCTGCGTGTAGTACATTTGACCTTGTCCAGACTCTTACACTCTTTCAACGTTGCTTCTCCTTCAAATCAAGTTGTTGACATGACAGAGAGCTTTGGACTCACAAATTTAAAAGCAACCCCCCTCGAAGTTCTCCTAACTCCACGTCTAGACAACAAACTTTATGAGAACTAG 1584 0.4527 MDAFVLKTLISGIVALLVWPLFYQFKKTLGGNRKICSAPQAAGAWPIIGHLHLFGSHQLTHKTLGVMAEKHGPIFTIKLGSYKVLVLSSWEMAKECFTVHDKAFSTRPCVAASKLMGYNYAMFGFTPYGPYWLQVRKLTTIELLSNNRLEPLKNTRTFELDAAIRGLYRLWSKEGCPEGGVLVDMKQWFGDLTHNIAIRMVGGKPYCGVGDGYADGEARRYRRAMRDCVCLFGAFVLSDAFPFLRWLDINGYEKDMKRTASELDTLVEGWLEEHKRKRALNVNGKEERDDFMDVLLNVLQGTEISGYDSDTIIKATCLNLILAGTDPTMVTLTWVLSLLLNHPTELKRTQHELDTLIGKERKVEESDIKKLVYLQAVVKETLRLYPPSPIITLRAAMEDCTFSCGYHIPAGTQLMVNAWKIHRDGRVWSDPHDFKPERFLTSHKDVDVKGQNYELVPFSSGRRACPGASLALRVVHLTLSRLLHSFNVASPSNQVVDMTESFGLTNLKATPLEVLLTPRLDNKLYEN* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0621 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Vra11g0621 527 Gene3D Cytochrome P450 28 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0621 527 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0621 527 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0621 527 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0621 527 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0621 527 Pfam Cytochrome P450 40 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0621 527 PANTHER CYTOCHROME P450 CYP82D47-LIKE 1 525 - -
Vra11g0621 527 PANTHER CYTOCHROME P450 82C3-RELATED 1 525 - -
Vra11g0621 527 SUPERFAMILY Cytochrome P450 44 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0621 527 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0621 527 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0621 527 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0621 527 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0621 527 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0621 527 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0621 527 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0621 527 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0621 Vra-Chr11 4927855 4930507 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0621 38 525 Cytochrome P450 AT4G31940 50.909 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0621 - - gmx:100792065 968.763