Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0620 ATGGCCATTGACATGATCATGGATGTTTTCCAGCTCCAAACGCTGATTTTAGGCGTTCTTGTCTTGCTTGTAGGTGCCTTGCTTTATCAGTTAAAGAAGACAAATGGTCCTAATGCAAAGATCTGCACTGTGCCTCAAGCAGCAGGAGCATGGCCTATTGTTGGTCATTTGCACCTCTTCGGGGCTAATCAACTTACACACAAGACACTTGGGACGATGGCTGAAAAACATGGACCAATTTTCACAATAAAACTTGGTTCGAACAAAGTTCTGGTGTTGAGTAATTCGGAGATGGCCAAAGAGTGTTTCACTGTCCACGATAAAGCATTCTCCACCAGGCCATGTATTGCAGCAACAAAGCTAATGACATACAATTCAGCAATGTTTGGCTTCGCTGCTCATGGACCTTATTGGCGTGAGATGAGGAAATTTACCACTATTGAGCTTCTCTCTAACCAAAGGCTTGAATTGCTTAAGGATACAAGAACATCTGAGTTAGAGACTGCAACTAGGGAGTTATACAAGTTATGGTCAAGAGAAGGTTGTCCAAAGGAAGGAGTTTTGGTAGACATGAAGCGGTGGTTTGGAGATTTGACGAATAATATTATTCTGAGAATGGTGGGAGGGAAGCCATATTATGGGGCTAATAGTGATGCTTCTGCAGAAGGTGAAGCAGGAAGATATAAGAAAGCTATGAGGGACTTTATGAGTTTATTTGGGGTGTTTGTATTATCCGATGCCATTCCACTTCTGGGGTGGATAGATAACAATGGATACAAAAAGGCTATGAAGAGAACAGCTAGTGAAATAGACACTTTGGTTGAAGGGTGGCTGGAGGAACACAAAAGAAAAAGAAACGCGAGTACAAATGGAAAGGAAGAACAGGATGTCATGGATGTTATGCTTAATGTTCAGCATGATCTTAAGGTTTCTGGCTATGATTCAGACACGATCATCAAGGCTACTTGCCTGAATCTGATCTTGGCAGGAGGAGACAGCATCATGGTGGCTCTAACTTGGGCCCTGTCTCTACTTCTAAACAATGAAACGGAGCTTAAAAAAGCACAAGAAGAATTGGACACTCATGTTGGGAAGGACAGGAAGGTGGAAGAATCTGACATAAAGAAGCTAATGTACATCCAAGCCATTGTAAAGGAAACCATGCGGCTGTATCCACCAAGTCCTATACTGACCCTTCGTGCAGCAATGGAAGAGTGTACATTTTCATGCGGCTATCATGTTCCTGCTGGAACACATTTGATTGTGAATACTTGGAAGATCCAAAGAGATGGTCGTGTCTGGCATGATCCTCATGATTTCAAGCCTGAAAGGTTCTTGACAAGCCACAAAGACGTTGATGTAAAGGGTCAGAACTATGAGTACTTCCCTTTTGGTTCCGGAAGAAGAGCATGTCCGGGGGCCCCACTGGCTCTTCGTGTTGTGCACTTGACCTTGGCTAGACTCTTACACTCTTTCAATGTTGCTTCGCCCTCAAATCAAGCTGTAGACATGACAGAGAGCATTGGACTCACAAATTTAAAAGCAACCCCACTTGAAGTTCTGCTAACTCCACGTTTAGATTCAAAGTTTTACGAAGACTAG 1602 0.432 MAIDMIMDVFQLQTLILGVLVLLVGALLYQLKKTNGPNAKICTVPQAAGAWPIVGHLHLFGANQLTHKTLGTMAEKHGPIFTIKLGSNKVLVLSNSEMAKECFTVHDKAFSTRPCIAATKLMTYNSAMFGFAAHGPYWREMRKFTTIELLSNQRLELLKDTRTSELETATRELYKLWSREGCPKEGVLVDMKRWFGDLTNNIILRMVGGKPYYGANSDASAEGEAGRYKKAMRDFMSLFGVFVLSDAIPLLGWIDNNGYKKAMKRTASEIDTLVEGWLEEHKRKRNASTNGKEEQDVMDVMLNVQHDLKVSGYDSDTIIKATCLNLILAGGDSIMVALTWALSLLLNNETELKKAQEELDTHVGKDRKVEESDIKKLMYIQAIVKETMRLYPPSPILTLRAAMEECTFSCGYHVPAGTHLIVNTWKIQRDGRVWHDPHDFKPERFLTSHKDVDVKGQNYEYFPFGSGRRACPGAPLALRVVHLTLARLLHSFNVASPSNQAVDMTESIGLTNLKATPLEVLLTPRLDSKFYED* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0620 533 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0620 533 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0620 533 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0620 533 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0620 533 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0620 533 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0620 533 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0620 533 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0620 533 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0620 533 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0620 533 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0620 533 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0620 533 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0620 533 PANTHER CYTOCHROME P450 CYP82D47-LIKE 7 531 - -
Vra11g0620 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Vra11g0620 533 PANTHER CYTOCHROME P450 82C3-RELATED 7 531 - -
Vra11g0620 533 SUPERFAMILY Cytochrome P450 50 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0620 533 Pfam Cytochrome P450 46 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0620 533 Gene3D Cytochrome P450 40 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0620 Vra-Chr11 4917916 4920157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0620 12 531 Cytochrome P450 AT4G31940 51.141 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0620 - - gmx:106794123 928.702