Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0617 ATGTCATTTTCGTTGTTCGCCACGCCGCAGCAGCAACAACAACCACAACCGCAGCAGTCTCCTTTTCAACCACAGCAAACTAGTCTGTTCCTTCCGCAGCAGCAGCCGCAGTTTCAACCACAACAGCAGCAGCAGCCGCAGCAGCCGCAACAGCAGTTGTTTTTGTTCACTAACGATAAAACACCCGCTAGTTATAGTACCAATTGGGCGGATCTACATCCTGACTCCCAGAAGATTCTCCTTCAGATAGAGGAGCGGATATTGGAGTATAGGGATGAAAGCCAGAGACTAGATCAGTGTAGTCGTCTTTATGATTCTTCCGTTTCCAACGATGGCTTTGAGCTTGACGCGGGCCATATTGTTCAGGAACTTGGTGGAATTAGCACTGGCATGGAACGACAAAAGACGTTGCTGCAGGAACTGATGTCCACTGTTAAGGAAATGCTACGCAACACAGAGGTTGCTGTTCGATCCTTTATGATACTACGCCCCAGGTTCCTTCATCCCAGTGGGGGTTCATCAAGTGCCACTGCCCCATCACAGACTCCTGGAGCGACTATAGCACCTGGCTCAAGTGGCCAACCAATAAATGCATCTATAGTGCCTGTTTTTGATTTCTACAGTGGTCTTCCAAAGAAACCATCTCCATTTTTACAGCAAACAATTTTAAGATTTGAGAAGTATCTTGGTGAGTGCCATCAGTGGATTGAAGAGTTAGAGCAGCTGCTTCTTTTGGACTCTGAGAGAAATGCTCCCAGTAACGGATCCTCATTACTACAATCTCTTCCCAAGGTCATGACAAATGTGCATGACTTTTTTGTTCATGTGGCTGCGAAGGTCGAGAGCATTCATCAGTTCATTGAATCTATGAAATCATCATACCTAGCTGATCAGCGTCGCCAGGGGGAGGTGAATGACCCGTTTTTGGAGGCAGATCGGCGAGAAACTGCTAGACAAGAAGCTGCCTCAAAAAGAGTTCATCCAACATTGCATTTACCTGCAAATCCACAACCCTCAACTCAAGTTGCTGGGTTGTTTTCCAGTTCAGGGACTCAAGCGGCATTGCCTGCCCCACAGACTTCTGCAGCAACTACATCATTGTCATCAGGAAGTGGATTCTCTCTTTTTAGCACACCATCCTCTGCTCCATCGTCTTCTGCATTGTCATCTTTATTTACGACACCAACTCCTGCTCCAGGACCTCAAACCTCACTTTTTGGTTCTGCAACATCTGTACCAGCATCAACTCCCTCTCTGTTCGGTAATACCACTCCATTGTTTAGTTCAACCCCAGCTACAAATTCACTCTTTTCAACTCCATTTGGTTCAGGCGCTGCAACAGGATCTGGGGCTAGCTTTGGACCTGGATCGAAAAATCCACGGGCGAAATCCAGAACTGCTCGACGCTGA 1410 0.4723 MSFSLFATPQQQQQPQPQQSPFQPQQTSLFLPQQQPQFQPQQQQQPQQPQQQLFLFTNDKTPASYSTNWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDSSVSNDGFELDAGHIVQELGGISTGMERQKTLLQELMSTVKEMLRNTEVAVRSFMILRPRFLHPSGGSSSATAPSQTPGATIAPGSSGQPINASIVPVFDFYSGLPKKPSPFLQQTILRFEKYLGECHQWIEELEQLLLLDSERNAPSNGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQFIESMKSSYLADQRRQGEVNDPFLEADRRETARQEAASKRVHPTLHLPANPQPSTQVAGLFSSSGTQAALPAPQTSAATTSLSSGSGFSLFSTPSSAPSSSALSSLFTTPTPAPGPQTSLFGSATSVPASTPSLFGNTTPLFSSTPATNSLFSTPFGSGAATGSGASFGPGSKNPRAKSRTARR* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0617 469 MobiDBLite consensus disorder prediction 438 454 - -
Vra11g0617 469 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 6 441 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Vra11g0617 469 MobiDBLite consensus disorder prediction 438 469 - -
Vra11g0617 469 MobiDBLite consensus disorder prediction 305 411 - -
Vra11g0617 469 Gene3D - 213 303 - -
Vra11g0617 469 MobiDBLite consensus disorder prediction 305 325 - -
Vra11g0617 469 MobiDBLite consensus disorder prediction 333 411 - -
Vra11g0617 469 MobiDBLite consensus disorder prediction 1 50 - -
Vra11g0617 469 Coils Coil 131 151 - -
Vra11g0617 469 MobiDBLite consensus disorder prediction 170 193 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0617 53 469 NAC Transcription Factor Family AT4G37130 63.073 2.12e-177 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0617 K14307 - gmx:100776992 691.804