Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0610 ATGGGAGATCTGTTCAGTGGAGGTGCTGTGGGAGCACTGATGGGAGAGGCATTGAAAGGGGCTATTTCAATCATAAAAAAAGGACTAGCCTTCAAATCCACACTAGATAGCAACATAGAAACCTTAAACTCTTTGGCTCCTCTGGTGGAGGAGATGAAGATGTGCAACATGATGTTGGATCGGCCCAGCAAGGAGATAGAGAAGTTGGAGAGTCTCATGCGAAATAGTCAAGAGCTGGTTCGGAAGTGCTCGAAATTGGGTCGGTGGAAAATGTGGTCGTTCCCTTATTTCCAGAGCAAGCTTCGGAGCAAGGAGGTGGCTCTCCAGACGCATTTATCGATGAACATGACGGCGCAGAACACGGTGAACTTGATGAAGTTGGTGGACGACATGAGGAAGGTTCTGGAGATTCTGCTAAAAGAGGAATTCGGGCGTTATCCTGAGTACCGGTTGATTGATTTGTGTGGGGCTCCTCAAGAACCTGAGTGTTTGGGAATGGATGTGCCTTTAAGAAAGCTGAGGATTGAGTTGCTCAAGGATGGTGTGTCCGTTCTTGTCTTGACTGGTTTGGGAGGGTCGGGGAAAAGCACACTGGCTAAGAAGATATGTTGGGACCCTCAAATCAAAGACAAGTTCGGGGCAAACATCTTCTTTGTCACTGTATCAAAAACTCCCAACTTGAAGACCATTGTAGAGACACTGTTTGAACACTGCCGTTGTCGGGTGCCGAAGTTTCAAACCGATGAAGATGTAGTAAATCGACTGGAAGTTCTGCTGAGGGTTTTTGGGAAACATCCAATATTGTTGGTCTTGGATGATGTTTGGCCTGGCTCAGAAGACCTTGTTGAGAAGTTTAAAATTCAGATACCTGATTACAAGATTTTGGTTACTTCAAGGGTTTCATTTCCAAGATTTGGCACCTCATACCAGTTGGATAAACTTGATCATGTCCATGCAGAATCCCTTTTCCGTCACTTTGCACAGCTGAAAGACAAAAGCTCATACATACCTGAAAGAAATATTGTCGACGAGATAGTGAAAGGTTGCAAGGGTTCACCATTGGCCCTTAAGGTGATTGCTGGATCGCTCTGTAACCAGCCTTTTGAGGTGTGGAAAAATATGAAGGAGCGTTTACAAAAGCAATCCATTCTGGAGTCTGATAGTACTGATTTGCTTTTTCGTCTTCAACAAAGTTTAGATATATTGGAGACTAAGTTCTCCGTCAATGAAAAGGAATGTTTCATGGATCTGGGGCTATTTCCTGAAGATCAAAGAATCCCTGTAGCCGCCCTCATTGATATGTGGGTAGAACTGTATAACCTTAATGAAGATGGTACCAATGCAATGTCCATTATCCATGATTTAACCACCAGGAATTTGATTAATGTTATAGTTACAAGGAAAGTTGCAAAGGATACAGACATGTACTACAATAACCATTTTGTTTTGGTGCATGATCTTCTTAGAGAGCTAGCAATACATCTGAGTAAAGGGGAAACATTTGAACAGAGAGAAAGAGTGATGATTGAGTTAAAGGGAGATAATCGTCCTGAATGGTGGGTAGGACTGAATCCGCTAGGAATCATAGGCCGTTTGTTCTCATACATCATGGGAATGTTGTATAGACAGAAACAACCAAAGGTTGCTGCTCGCATATTGTCTATTTCAACTGATGAAACGTTTAATTCGGATTGGTGTGACATGCAACCAGACGAAGCTGAGGTTCTGGTTTTAAATCTTCTTTCTAGCCAGTACTCGTTGCCAGAGTTCACAGAGAAGATGCATAAACTGAAAGTTCTGATTGTCACAAATTATGGTTTCCATCCTTCTGAACTAAACATGTTTGAGCGACTTGGTTCTTTAAATAATTTGAAAAGAATCAGATTGGAAAAGGTTTCAATCCCTCCCCTGTGCATATTGAAGAATCTACGAAAATTGTCCATTCACATGTGTAATACACGGCAGACTTTTGAAAGATATTCTATCTCGGATGCAATGCCAAATCTTGTGGAGATGAGCATTGATTATTGCAAAGATCTGGTTAAATTGCCTGATGGGCTGTGTAACATCACCCCATTGAAAAAGCTTAGTATCACTAACTGTCACAGGCTTTCTGCACTGCCACGAGATCTTGCAAAGCTGGAGAATTTGGAAGTTCTAAGGCTATGTTCCTGCTCTGATTTGGCAGAGATGCCAGATTCTGTTAAAGGGCTTAACAAACTTAGCTGTCTCGATATCTCAGACTGTTTAAATCTTACCAAATTACCAGATGACATTGGTGAGTTGAAGCTTCAGAAGCTCTACTTGAAGGGTTGCTCAAAACTGAGAGAACTGCCGCACTCGGTCGTTAAGTTTGAAAATTTAGACCACAAAATACACGTGATCTGTGATGAAGAAATGGCTTCCCTATGGGAAAGTTCTACCATTCGCAATTTGAAGATAGAGATATCTACAGTGGAGGTTAACTTAAATTGGCTTCCTGGAGCTCATTCCTGA 2496 0.4207 MGDLFSGGAVGALMGEALKGAISIIKKGLAFKSTLDSNIETLNSLAPLVEEMKMCNMMLDRPSKEIEKLESLMRNSQELVRKCSKLGRWKMWSFPYFQSKLRSKEVALQTHLSMNMTAQNTVNLMKLVDDMRKVLEILLKEEFGRYPEYRLIDLCGAPQEPECLGMDVPLRKLRIELLKDGVSVLVLTGLGGSGKSTLAKKICWDPQIKDKFGANIFFVTVSKTPNLKTIVETLFEHCRCRVPKFQTDEDVVNRLEVLLRVFGKHPILLVLDDVWPGSEDLVEKFKIQIPDYKILVTSRVSFPRFGTSYQLDKLDHVHAESLFRHFAQLKDKSSYIPERNIVDEIVKGCKGSPLALKVIAGSLCNQPFEVWKNMKERLQKQSILESDSTDLLFRLQQSLDILETKFSVNEKECFMDLGLFPEDQRIPVAALIDMWVELYNLNEDGTNAMSIIHDLTTRNLINVIVTRKVAKDTDMYYNNHFVLVHDLLRELAIHLSKGETFEQRERVMIELKGDNRPEWWVGLNPLGIIGRLFSYIMGMLYRQKQPKVAARILSISTDETFNSDWCDMQPDEAEVLVLNLLSSQYSLPEFTEKMHKLKVLIVTNYGFHPSELNMFERLGSLNNLKRIRLEKVSIPPLCILKNLRKLSIHMCNTRQTFERYSISDAMPNLVEMSIDYCKDLVKLPDGLCNITPLKKLSITNCHRLSALPRDLAKLENLEVLRLCSCSDLAEMPDSVKGLNKLSCLDISDCLNLTKLPDDIGELKLQKLYLKGCSKLRELPHSVVKFENLDHKIHVICDEEMASLWESSTIRNLKIEISTVEVNLNWLPGAHS* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0610 831 Pfam NB-ARC domain 171 389 IPR002182 GO:0043531
Vra11g0610 831 PRINTS Disease resistance protein signature 184 199 - -
Vra11g0610 831 PRINTS Disease resistance protein signature 261 275 - -
Vra11g0610 831 PRINTS Disease resistance protein signature 349 363 - -
Vra11g0610 831 PRINTS Disease resistance protein signature 712 728 - -
Vra11g0610 831 Gene3D - 156 302 IPR027417 -
Vra11g0610 831 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 3 134 IPR008808 -
Vra11g0610 831 Gene3D - 313 392 IPR042197 -
Vra11g0610 831 Gene3D - 395 493 IPR036388 -
Vra11g0610 831 Gene3D Ribonuclease Inhibitor 543 802 IPR032675 -
Vra11g0610 831 ProSiteProfiles RPW8 domain profile. 1 150 IPR008808 -
Vra11g0610 831 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 2 816 IPR039203 GO:0050832
Vra11g0610 831 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 417 IPR027417 -
Vra11g0610 831 SUPERFAMILY L domain-like 574 788 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0610 Vra-Chr11 4825714 4830050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0610 189 778 WRKY Transcription Factor Family AT5G45050 23.137 7.25e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0610 - - gmx:100792590 1261.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0610 11 4825714 4830050 Vra7g1119 7 27069079 27072741 PCT