Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0604 ATGGAGTCATTTGCCTCTAATAAGCTTCCTTTTCTTTCACTGTTTTGGCTTGTGTTCCTCAGTCCTCTAGTGTGCTGTCAACTTTACTATAACTTCTATGACTCAACTTGTCCAAACCTCACCGGAATTGTTCGATACAACGTGTTGTCAGCTATGGCCAAGGACGCAAGGATTGCTGCTTCTCTCTTACGCCTTCATTTTCATGATTGTTTCGTTCTTGGATGTGATGCATCGGTGCTGCTAGATGACACGGATACTCTAAAGGGGGAGAAAAATGCACTGCCTAATAAAAACTCACTCAGAGGATTTGAACTGATTGACACAATCAAGGCCAACTTGGAAAAGGCTTGTCCTTCCACTGTGTCATGTGCTGATATACTAACTCTAGCAGCAAGAGAAGCTGTTTATCTTAGCAGAGGTCCATTTTGGTCTGTGCCTCTTGGACGTAGAGATGGTACGACAGCAAGTGAGAGCGAGGCAAATAACTTGCCATCACCCTTTGAACCTTTAGAAAACATTACGGCCAAGTTTATATCAAAGGGTCTTGAAAAGAAGGATGTAGCAATACTCTCAGGTGCACACACTTTTGGATTTGCTCAATGCTTCACGTTCAAGCCGAGGCTCTTCGACTTTGGTGGGTCTGGTAAATCTGATCCAGCACTAGATGAGTCAGTTGTAGAGAGTTTAAAAAAAGTGTGTCCAAACCAAGCTGATTCTGACACCAATTTGGCTCCCTTGGATCCCGTGACTACTAACACATTTGACAACAGTTACTACAAAAACATTGTGAACAAGTCGGGTTTACTTCAGTCGGACCAGGCTCTTTTGGGTGACACTGCAACTGCTTCATTGGTCAACAACTATAGCAAGTGGCCTATTCTGTTCTTTAGAGACTTTGCTGTTTCTATAGAGAAAATGGGACGCTTAGGTGCCCTTACAGGACAACAAGGCCAAATAAGGGCAAACTGTAGGGCTGTCAACTAA 984 0.435 MESFASNKLPFLSLFWLVFLSPLVCCQLYYNFYDSTCPNLTGIVRYNVLSAMAKDARIAASLLRLHFHDCFVLGCDASVLLDDTDTLKGEKNALPNKNSLRGFELIDTIKANLEKACPSTVSCADILTLAAREAVYLSRGPFWSVPLGRRDGTTASESEANNLPSPFEPLENITAKFISKGLEKKDVAILSGAHTFGFAQCFTFKPRLFDFGGSGKSDPALDESVVESLKKVCPNQADSDTNLAPLDPVTTNTFDNSYYKNIVNKSGLLQSDQALLGDTATASLVNNYSKWPILFFRDFAVSIEKMGRLGALTGQQGQIRANCRAVN* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0604 327 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g0604 327 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g0604 327 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g0604 327 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g0604 327 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g0604 327 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g0604 327 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g0604 327 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g0604 327 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g0604 327 Pfam Peroxidase 47 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra11g0604 327 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra11g0604 327 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra11g0604 327 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra11g0604 327 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra11g0604 327 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra11g0604 327 SUPERFAMILY Heme-dependent peroxidases 27 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vra11g0604 327 CDD secretory_peroxidase 27 326 IPR033905 GO:0004601|GO:0042744
Vra11g0604 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Vra11g0604 327 PANTHER PEROXIDASE 72-RELATED 12 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g0604 327 ProSiteProfiles Plant heme peroxidase family profile. 27 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra11g0604 327 PANTHER PEROXIDASE 12 326 - -
Vra11g0604 327 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Vra11g0604 327 Gene3D Peroxidase, domain 2 164 306 - -
Vra11g0604 327 Gene3D - 31 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0604 Vra-Chr11 4747408 4748833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0604 27 323 Peroxidase AT1G49570 60.667 1.93e-128 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0604 K00430 - gmx:100815708 582.793