Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vra11g0577 | ATGGCGGACAAGGAGCCAGTGAGCGGAAGGCGAAGGCCCAGGGGACCGGAGTCCACCGCCCGCAGCGAAGCGTTGGAGCGTCTCAAGGCTCGTCTCCGCGGTGGTCGTGGATCCGATGGCACTGGGCCCCAAATCAGGTTAGAAAACCCTGTCTACGACACTGTCCCCGAGGACGAGTACAATGCCCTCGTCGCAAAGCGCCGTGAACAGGCGCGCTCCTTTATAGTCGACGACGAAGGAATCGGATACGGCGACGAGGGCGAGGAAGAGGATTGGTCTCAGGCCGGATTCACTCTCTCCTCTGATGAATCCGAAGGCGAATCGGAAAGGCCGAAGCGGAAGAAGGTCGAGAAGAAGGATCCTCAGCCGAAACGGCCTTCTTCATCGCTCTCCGCCGCTGCGGCCATGATGGGAGGGCAGAAGTTGGCCTCCATGTTCACTTCCTCCGTTTTCAAGAAGAGTAGAGACGATAAAGTCTGCGAGAGCATTGTTGACGATGTTATCGCGGAGTTCGCTGCGGACGAGACTGATAGACTGAGGCGTAGAAGGGCGCAAGGGAATTCCTCTTCCATTTCTGACGCAAACAATGTTTTGCGTGTTAATACTGGGTTTAGGGATAAGCCTTCTGTTGGTATGATGCAAGATTCTTCTTCATTGCCGGAACATGGTAACCCTGAGTCTGTTAAGGTATTTGTTGAGAGTGATGGTTTTGACTCGGGGTTTGAGCCAAAGAGCGCGGTGGTTAGTGAAGTCCAAGATTTCGGGCGTGGTAGTTCTGAGAATGGGCAGACACCTACAGTGGTAGCCGATGATTCTCAAGTTAATGAATGTATGGTTGAGGCGAAAGAAGTGAAGAGTTTTGAAATTGCAGTGAAAGCGGATGCAAAGAAGGAGGTGTTCACTTTGAACGCGAAGGTTAAAGAAGAGGACGACACTGCATTGTCTGCTACTGCCGGTTGGAAGGAAACAATACGCGGTGCTGGTGGGGTTGATGTTGCTGATTCGAAGGATCCTTTAGAGTTTGATCTGGAGGAAGATGGATCACTGCCTTTCTACATCTTAGATGCTTATGAGGAGTTTTATGGGGAAAACAGGGGCACCATTTATCTCTTCGGGAAGGTTAAGACTGGGGATTTGTATCAGAGTTGTTGTGTTATTGTCAAGAGCATGCAGAGGTGTGTCTATGCAATTCCTAGCCGACCCTTGCTTCGCACTGAAGAGATGATGAGTCTCGATAGAGATCTCCAGGAGTCTCGAATTTCTTCTGCGGATTTCTTTAAAAAGTTGCAAGATGCAGTAGCTGATGTTAAGAATGAGATAGCACAACATCTGGTGAATTTGGATGTTTCGAACTTTAGCATGGCACCTGTTAAGAGGAAATATGCATTTGATCGATTTGAAGTTCCTACAGGGGAAAATTATGTGGTGAAAATAAATTATTCATTCAAGGACCCTGTACTTCCAGCAGATCTCAAAGGCGAAAGTTTCTGTGCTCTCTTAGGAACTAGTTGCAGTGCCCTTGAGCTTTTCCTGATTAAACGGAAGATAAAGGGGCCTTCATGGCTACAGGTTTCAAAGTTTGCTACAAGCTCATCTTCCCGAAGGGTTAGCTGGTGCAAATTTGAAGTAACTGTTGACTCTCCTAAGCACATAAAGACATCAGCTCCTTCAAAAATCACTTATAATATTCCTCCAGTGGTTGTTGTAGCAATAAACTTGAAAACCACCATAAATGAAAAGCAGAACATAAATGAGATTGTATCAGCATCCGTTGTCTGTTGTAACATGGTTAAGATTGATGCCCCTATGATGGCTTCAGAGTGGAGGAGACCCGGAAGGCTGACCCATTTTACTGTTGTTCGTAAACTTGATGGGAGTATATTTCCAATGGGATTTAACAAGGAGGTTACGGACAGAAACTTAAAAGCTGGTTCAAATATTCTGTGTGCTGAAAGCAGTGAAAGAGCTTTGTTGAACCGCTTGATGTTAGAATTGCACAAGTTGGATTGCGATGTTCTGGTTGGACATAATATATCTGGATTTGACCTGGATGTTCTTTTCCACAGATTCCAGGCGTGCAAAGTGGCAAGCAGCATGTGGTCTAAACTAGGCCGCCTCAACCGATCGACTATGCCAAAACTTGGAAGAAGAAGTAAGGTTTTTGGTTCTGGAGCAGATCCTGGTATAATGTCATGCATTGCTGGCAGGCTTCTTTGTGATACATACTTGTGTTCCCGTGACCTATTAAAGGAGGTTAGTTACTCTTTAAGTCACCTTGCAAAATCACACCTGAACAAGTTTCGGAAGGAAGTTGCTCCACATGAAGTTCCAAAAATGTTCCAGTCAGCAGAATCGCTAATGGAGCTTATTGAATACGGTGAAACAGATGCATGGTTGTCTATGGAACTGATGTTTTATTTAAGTATTCTTCCACTCACCCGTCAGCTGACTAATATAAGTGGTAATCTGTGGGGGAAAACCCTTCAGGGTGCTCGAGCACAGAGGGTTGAATATCTTTTGCTGCATACTTTCCATGCAGTGAAATATATGGTGCCAGACAAGTTCTCAAACTATTCCAAAGAAACGAAATTGACGAAACGTAGAGTAACCCACGATGCTGAAGATAGCAACTACGATGTAGATGTTGACGATGTAAACTATGACAATGATGCTTCTGAAGCTGATAATAAGAAAAGCAAAAAGGGTCCTTCTTATGCCGGTGGACTGGTTTTGGAGCCAAAGAAGGGTCTATATGACAAATATATACTGCTTCTGGATTTCAACAGTCTTTATCCTTCTATTATTCAGGAATACAATATTTGCTTTACAACTGTTGAAAGATCTTTGGATGGATCTTTTCCACGTCTACCATCTAGTAAAACAACTGGAGTCTTGCCAGAGGTGCTGAAAAATCTGGTAGATAGGAGGAAAAGGGTAAAGTCGTTGATAAAGAATGAAAAAAAGAAGAATGAAAAAGCTAATCCTATAAGGGTTCAGCAACTGGATATTCAGCAGCAAGCACTTAAGCTTACTGCTAACAGTATGTATGGGTGCCTGGGATTTTCCAATTCAAGATTTTATGCTAAGCCGTTGGCTGAGCTTATTACTTTACAAGGGAGGGAAATACTGCAGAGTACTGTTGATTTAGTTCAGAATGCCTTGAATTTAGAGGTGATCTATGGCGACACTGATTCAATAATGATTTACAGTGGGCTGGATGATATTGAGGAAGCTAATAAAATTGCTGTAAAAGTTATTCAAGAGGTCAATAAGAAATATAAATGTTTGGAAATTGATCTTGATGGTTTATATAAAAGAATGCTGCTTCTCAAGAAAAAGAAGTATGCAGCTGTAAAGTTGCTGTTTAAAGATGGCACCCCATATGAGGTGATTGAACGTAAAGGTCTTGACATTGTTCGTCGTGACTGGAGCTTATTAGCTAAAGAATTAGGAGATTTTTGCTTGACTCAAATTTTGTCTGGAGGGTCATGTGAAGATGTAGTGGAGTCAATCCACAACTCGCTCATGAAGGTACAAGAAGAAATGAGGAACGGACAAGTACCATTAGAGAAATATGTCATTACGAAGACATTGACTAAACCCCCGGAAGCTTATCCTGATGCCAAGAACCAGCCACATGTTCTTGTGGCACAAAGATTGAAGCAACAAGGTTACTCTTCTGGCTGTTCTGTTGGTGATACGATTCCGTATATAATTTGTTATGAACAGGGTGGCAGCTCAGGCAGTGCTGGTGGCATTGCTCAACGTGCTAGACATCCTGAAGAACTTAAACGGGAACAAGGGACATGGCTGATTGACATTGATTACTATTTATCACAACAGATCCATCCCGTAGTATCACGCCTTTGTGCATCGATTCAGGGAACAAGCCCAGAAAGACTGGCTGATTGCTTAGGGCTTGACTCCTCAAAGTTTCATCATAAATCAAGTGAAGCTTTTAATGATGATTCTAGCAGTTTACTCTTGTCTGCTGCTAATGATGAGGAGAGGTATAGGGGATGTGAGCCGTTGCTCTTGTCATGCCCCAGCTGCTCTGGTACATTCGACTGCCCACCCGTCTCTAAATCTATTTGCTGCTTGTTGGGAAGTGGAATGACAACCAGCGTATCCACCGAAGAATCTGATTTCAATTTCTGGCGAAAGATGTGTTGTCCTAAATGCCCCGAAGATGTCAAAATTTCTCCAGCGATGATAGCGAATCAGGTCAAAAGGCAAGCAGACATGTTTGTTTTGATGTACTATAAAGGTTTACTAACGTGTGATGATGAAACGTGTAAGCATACAACGCGAAGTATCAGCCTTCGGTTGGTTGGTGATTCCGAGAGAGGAACTGTTTGTCCAAATTATCCTCGCTGCAATGGTCGTCTGCTTAGAAAGTACACTGAAGCAGACTTGTACAAGCAGCTCTCGTATTTTTGCCACGTGTTTGACACTGTTTCTTGTATAGAAAAGATGGAGGCCAAATCTAGAATGACTATAGAGAAAGAGGTGATAAAAATTAGGCCGATGGTTGATCCCGCAGCTTCAACAGCGCAGAAGATCAGGGACCGATGTGCCTTTGGTTGGGTGAGACTGGAGAATCTGGTCGTAACAGTTTAA | 4620 | 0.4387 | MADKEPVSGRRRPRGPESTARSEALERLKARLRGGRGSDGTGPQIRLENPVYDTVPEDEYNALVAKRREQARSFIVDDEGIGYGDEGEEEDWSQAGFTLSSDESEGESERPKRKKVEKKDPQPKRPSSSLSAAAAMMGGQKLASMFTSSVFKKSRDDKVCESIVDDVIAEFAADETDRLRRRRAQGNSSSISDANNVLRVNTGFRDKPSVGMMQDSSSLPEHGNPESVKVFVESDGFDSGFEPKSAVVSEVQDFGRGSSENGQTPTVVADDSQVNECMVEAKEVKSFEIAVKADAKKEVFTLNAKVKEEDDTALSATAGWKETIRGAGGVDVADSKDPLEFDLEEDGSLPFYILDAYEEFYGENRGTIYLFGKVKTGDLYQSCCVIVKSMQRCVYAIPSRPLLRTEEMMSLDRDLQESRISSADFFKKLQDAVADVKNEIAQHLVNLDVSNFSMAPVKRKYAFDRFEVPTGENYVVKINYSFKDPVLPADLKGESFCALLGTSCSALELFLIKRKIKGPSWLQVSKFATSSSSRRVSWCKFEVTVDSPKHIKTSAPSKITYNIPPVVVVAINLKTTINEKQNINEIVSASVVCCNMVKIDAPMMASEWRRPGRLTHFTVVRKLDGSIFPMGFNKEVTDRNLKAGSNILCAESSERALLNRLMLELHKLDCDVLVGHNISGFDLDVLFHRFQACKVASSMWSKLGRLNRSTMPKLGRRSKVFGSGADPGIMSCIAGRLLCDTYLCSRDLLKEVSYSLSHLAKSHLNKFRKEVAPHEVPKMFQSAESLMELIEYGETDAWLSMELMFYLSILPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHTFHAVKYMVPDKFSNYSKETKLTKRRVTHDAEDSNYDVDVDDVNYDNDASEADNKKSKKGPSYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSLDGSFPRLPSSKTTGVLPEVLKNLVDRRKRVKSLIKNEKKKNEKANPIRVQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNALNLEVIYGDTDSIMIYSGLDDIEEANKIAVKVIQEVNKKYKCLEIDLDGLYKRMLLLKKKKYAAVKLLFKDGTPYEVIERKGLDIVRRDWSLLAKELGDFCLTQILSGGSCEDVVESIHNSLMKVQEEMRNGQVPLEKYVITKTLTKPPEAYPDAKNQPHVLVAQRLKQQGYSSGCSVGDTIPYIICYEQGGSSGSAGGIAQRARHPEELKREQGTWLIDIDYYLSQQIHPVVSRLCASIQGTSPERLADCLGLDSSKFHHKSSEAFNDDSSSLLLSAANDEERYRGCEPLLLSCPSCSGTFDCPPVSKSICCLLGSGMTTSVSTEESDFNFWRKMCCPKCPEDVKISPAMIANQVKRQADMFVLMYYKGLLTCDDETCKHTTRSISLRLVGDSERGTVCPNYPRCNGRLLRKYTEADLYKQLSYFCHVFDTVSCIEKMEAKSRMTIEKEVIKIRPMVDPAASTAQKIRDRCAFGWVRLENLVVTV* | 1540 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vra11g0577 | 1539 | Pfam | DNA Polymerase alpha zinc finger | 1331 | 1535 | IPR015088 | GO:0003887|GO:0006260 | |
| Vra11g0577 | 1539 | SUPERFAMILY | DNA/RNA polymerases | 896 | 1308 | IPR043502 | - | |
| Vra11g0577 | 1539 | PANTHER | DNA POLYMERASE ALPHA CATALYTIC SUBUNIT | 16 | 1538 | - | - | |
| Vra11g0577 | 1539 | MobiDBLite | consensus disorder prediction | 1 | 57 | - | - | |
| Vra11g0577 | 1539 | Gene3D | Helix hairpin bin | 968 | 1018 | - | - | |
| Vra11g0577 | 1539 | Pfam | DNA polymerase family B | 823 | 1292 | IPR006134 | GO:0000166|GO:0003677 | |
| Vra11g0577 | 1539 | Gene3D | - | 391 | 517 | - | - | |
| Vra11g0577 | 1539 | Coils | Coil | 426 | 446 | - | - | |
| Vra11g0577 | 1539 | Gene3D | - | 564 | 880 | IPR036397 | GO:0003676 | |
| Vra11g0577 | 1539 | MobiDBLite | consensus disorder prediction | 103 | 124 | - | - |
Showing 1 to 10 of 30 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vra11g0577 | K02320 | - | gmx:100798779 | 2553.09 |
Showing 1 to 1 of 1 entries