Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0548 ATGGAAGAGCACCTTATCGAGATTATTTCCTTCCTTGTTATCTTCATAGGCATAAAATTAGTATTCTTCAGAGAAAGACAAAAAAACCCACCACCAAGTCCACCTTCTCTTCCGGTAATAGGCAACCTTCACCAGCTGAAACAGCCGGTACACCGCACCTTCCACGTCCTCTCACAAAAATACGGACCTATTTTCTCTTTCCGGTTCGGCTCACAGCCGGTCCTCGTCGTTTCATCTGCATCCGCCGCCGAAGAATGTTTCACCACAAACGACATCATATTCGCGAATCGTTTCCCTTCTATCAAGACCAAGTTCCTCGGCTACGACAACACCATTCTTTTAGCAGCATCCTACGGCGACCACTGGCGGAACCTGCGACGTATAAGCTCCCTCGAGATCCTCTCCTCTCACCGTCTCAACTCCTTTTCGGGAATCCGAATCGACGAGACTCTGAAGCTGCTCCAAAATCTGGCTCGAACCTCCAACAAAGAAGAGTTCACGAGAGTGGAGTTGAGGTCCATGTTCGCGGATCTCACATTCAACACAATCATGAGAATGGTGTGTGGAAAACGCTACTACGGCTCCGAATACGAGGGGACCAACGCTGAGGAGGCTAAGAAGTTCAGAGACCTCATGAATGAGATGGCTCAGTTCGGGTTGGGATCACACCTCGGAGAATTTGTCCCTATCTTCAGATGGTTCGATTTTAGCCGTAGCCACACGAAGTTACGAAAAGTTGGAGAGAAGATGGACGCCCTGTTTCAAGGACTCATTGACGAACATCGGAACAAAGATCAAGATTCAAACACCATGATAGGACGTATGCTGCATTTACAAGAGTCACAGCCTGAGTATTACACCGACCAAATTATCAAAGGCCTTATAATGGTGTTGATTGTGGCTGGAACAGAGACTTCCGCCATAGCATTGGAGTGGGCCATGTCGAATTTGTTGAACAATCCGGAAGTGTTGGAAAAAGCAAGGATTGAATTGGACACCCTGATTGGAGAAGAGTGTTTGATGAAGGAAGAGGATGTAAGCAAATTGCACTACCTTCAGAATATAATCACTGAGACTCTGCGATTGCATCCTCCAGCGCCAATGCTATTGCCTCATTTCTCCTTTGAAGATTGCACTGTGGGAGGGTATGATGTACCAGGTAACACCATATTAATGGTGAATGCATGGGCCATACATAGGGATCCGGAGCTGTGGGTTGACCCAACAAGCTTCAAGCCGGAGAGGTTTGAGGATGGTCCTATAGACGAAAACAAGCTAATGCCTTTTGGGTTGGGGAGGAGAGCGTGTCCCGGTGCAGCCATGGCACAAAAAACTTTGAACTTGACTTTGGGTTCGTTGATTCAATGCTTTGAATGGGAAAGGATCGGAGAAGAGGAAGTTGACATGACCGAAGGACGGGGAACTCTGGTGCCCAAGGCCATTCCATTGGAGGCCAAATGCAAAACGCGTCCAATCATCAGCAAGATATTCTGA 1494 0.4752 MEEHLIEIISFLVIFIGIKLVFFRERQKNPPPSPPSLPVIGNLHQLKQPVHRTFHVLSQKYGPIFSFRFGSQPVLVVSSASAAEECFTTNDIIFANRFPSIKTKFLGYDNTILLAASYGDHWRNLRRISSLEILSSHRLNSFSGIRIDETLKLLQNLARTSNKEEFTRVELRSMFADLTFNTIMRMVCGKRYYGSEYEGTNAEEAKKFRDLMNEMAQFGLGSHLGEFVPIFRWFDFSRSHTKLRKVGEKMDALFQGLIDEHRNKDQDSNTMIGRMLHLQESQPEYYTDQIIKGLIMVLIVAGTETSAIALEWAMSNLLNNPEVLEKARIELDTLIGEECLMKEEDVSKLHYLQNIITETLRLHPPAPMLLPHFSFEDCTVGGYDVPGNTILMVNAWAIHRDPELWVDPTSFKPERFEDGPIDENKLMPFGLGRRACPGAAMAQKTLNLTLGSLIQCFEWERIGEEEVDMTEGRGTLVPKAIPLEAKCKTRPIISKIF* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0548 497 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0548 497 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0548 497 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0548 497 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0548 497 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 6 493 - -
Vra11g0548 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Vra11g0548 497 Gene3D Cytochrome P450 23 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0548 497 Pfam Cytochrome P450 31 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0548 497 SUPERFAMILY Cytochrome P450 31 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0548 497 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0548 497 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0548 497 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0548 497 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0548 497 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0548 497 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0548 497 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0548 497 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0548 497 PANTHER CYTOCHROME P450 FAMILY PROTEIN 6 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0548 Vra-Chr11 4195994 4197796 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0548 11 497 Cytochrome P450 AT4G37370 55.172 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0548 K13260 - gmx:100804509 743.421