Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0545 ATGGAATACAACCTTATCAACCTCTTTTACCTTTTCGTTTTTGTCATCACTTTGAAACTGTTGTTCTCCAGAAGGTTGAAAAACCCACCACCGGCTCCACCGTCTCTTCCAATAATCGGCAACCTATATCAGCTGAAAAAACAGCCACTGCACCGCGCCTTGCACGACCTCTCACAGAAATACGGTCCTATCCTCTCTCTCCGGTTCGGATCTCAACCCATCCTCGTCGTTTCATCAGCATCTGCTGCGGAAGAATGTTTCACAAAAAACGACATCGTTTTCGCGAATCGTTTTCACTCCACCACGTCCAAGTATCTTGGCTTCAACAACACCATTATCACGGCATCATCGTACGGCGACCACTGGCGCAACTTGCGTCGTATCAGCTCCTTAGAAATCCTCTCTAATCACCGCCTTAACTCGTTTTTGGGAGTACGAAAGGACGAGACCATGAAGTTGCTTCGAAAGATGGTTAGAATCTCTGGTAAAGAAGAATCAGCGAAAGTAGAACTGAGACCCATGTTTGCAGAACTCACGTTCAACATAGTGATTAGAATGGTGTGTGGAAAACGCTACTACGGTGAGGAATACGACGGCACCACCGCTGAGGAGGCTAAGAAGTTCAGAGAGCTCATGAATGAGATATCGCAATTTGGGTTGGGGTCCAACCTCGGAGATTTTGTGCCGCTTTTCAGAATTTTTCGAAGTCACAAAAAGTTACGAAAGGTTGGAGAGAAGCTAGATGCGTTCTTCCAAGGACTCATTGATGAGCATCGGAATAAGAAGGAAAGTTCAAATACCATGATCGACCACTTGCTTTCCTCGCAGAAGTCACAACCTGACTATTACACTGACCAGATCATCAAGGGACTTATTATGGCATTATATGTGGCTGGAACAGAGACTTCCGCTGTAGCATTGGAGTGGGCAATGTCTAATTTGTTGAACCAGCCAGAGATATTAGAGAAATTAAGAATTGAAATCGACATGGAAGTTGGAGAAGAGCGTCTGATAGAGGAAGAAGACGTTCCCAAATTATCATACCTTCAGAATGTTATATCTGAGACTCTACGATTGCATCCACCACTGCCCATGTTATTGCCCCATTTATCCTCTCAAGATTGCAACGTGGGAGGTTATGACGTGCCACGTAACACTATGTTAATGGTGAATGCATGGGCCATACATAGGGACCCGAAGCTGTGGGCTGACCCGACAAGCTTTAAGCCCGAAAGGTTTCAGAATGACCCAGTGGCTGCACACAAATTAATGCCTTTTGGGTTGGGAAGGAGGGCATGTCCTGGTGTTGGCATGGCCCAAAGAACTATGGGCTTGACTTTGGGCCTGTTGATTCAATGCTTTGAGTGGAAAAGAGTTGGTGAGGAAGAAATTGACCTCACTGAAGGACGAGGAACTATTGTGGCCAAGGCAATTCCATTGGAGGCCCAATGCAAAGCACGTCCAATCGTTAGCAAGATCTTCTAA 1485 0.4579 MEYNLINLFYLFVFVITLKLLFSRRLKNPPPAPPSLPIIGNLYQLKKQPLHRALHDLSQKYGPILSLRFGSQPILVVSSASAAEECFTKNDIVFANRFHSTTSKYLGFNNTIITASSYGDHWRNLRRISSLEILSNHRLNSFLGVRKDETMKLLRKMVRISGKEESAKVELRPMFAELTFNIVIRMVCGKRYYGEEYDGTTAEEAKKFRELMNEISQFGLGSNLGDFVPLFRIFRSHKKLRKVGEKLDAFFQGLIDEHRNKKESSNTMIDHLLSSQKSQPDYYTDQIIKGLIMALYVAGTETSAVALEWAMSNLLNQPEILEKLRIEIDMEVGEERLIEEEDVPKLSYLQNVISETLRLHPPLPMLLPHLSSQDCNVGGYDVPRNTMLMVNAWAIHRDPKLWADPTSFKPERFQNDPVAAHKLMPFGLGRRACPGVGMAQRTMGLTLGLLIQCFEWKRVGEEEIDLTEGRGTIVAKAIPLEAQCKARPIVSKIF* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0545 494 SUPERFAMILY Cytochrome P450 30 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0545 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Vra11g0545 494 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0545 494 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0545 494 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0545 494 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0545 494 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0545 494 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0545 494 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0545 494 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0545 494 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0545 494 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 490 - -
Vra11g0545 494 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 490 - -
Vra11g0545 494 Gene3D Cytochrome P450 22 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0545 494 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0545 494 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0545 494 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0545 494 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0545 494 Pfam Cytochrome P450 30 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0545 Vra-Chr11 4187232 4189117 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0545 7 494 Cytochrome P450 AT4G37340 55.110 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0545 K13260 - gmx:100804509 832.017