Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0533 ATGTTTGTTCCGTCACCACAAACAAGTAAGTTTAGCATGAAGACGTTTGATAAACCAGTTTCTGCAGCTACTTTTGTTTTCTTTTTGATCCTTTGTGATGTATCTCTAGCGACAATTGAGAGAAAAAATGATAATGAAAAGAGTACTTACATTGTTCATGTGGCCAAATCTGAAATGCCGACAATATTAAATCATCATTCAATTTGGTATCGCTCCATATTGAAATCGATATCTGACTCAGCAGAAATGCTCTACCACTATGACAATGCGATTCATGGATTTTCAACGAGATTAACTCCCGAAGAAGCCCGATTGTTGAAGAGTGAAATCGGGATTCTGAAGGTGCTGCCGGAGAAAATATACAAGCCACTCACAACTCGAACACCGCAGTTTCTTGGGCTTGATAAAATCAAAGACATGTTTCCTGAATCAAACGCGACGAGTGACATCATTATTGGACTCCTCGACACTGGTGTTTGGCCTGAAAGCAAGAGTTTTGACGATGTCGAACTAGGACCCGTTCCTATGAGTTGGAAAGGCAAATGTGAATCAGGTCAGAATTTCAGTGCCGCCAATTGCAATAGAAAACTAATAGGAGCTAGGTTCTTCTTGAAAGGCTTCGAGGCCTCAGTGGGTCCCCTTAATGCAACGCAGTTTAGATCACCACGAGATTCTGACGGCCATGGCACCCACACTGCAAGCACAGCTGCAGGTTCTACAGTGAAAGATGCGAACTTATTTGGTTATGCTTCTGGGGTCGCGCGTGGAATGGTCCCACGCGCTAGAATTGCTATCTATAAGGTTTGTTGGCAAGATAATTGTGTTGCTTCTGATATACTGGCGGCAATGGACGCAGCCATCTCTGATAATGTCAATGTCATTTCAGCGTCACTCGGAGGACAAGCAATTGATTACGATGAAGAAAACCTTGCCATTGGAGCCTTTGCAGCAATAGAGAAAGGGATTGTAGTTGTATGTGCTGCAGGAAACGATGGTCCTACCAACTCTACTCTCCAAAATGTAGCACCTTGGATGATCACTGTGGGAGCTGGCACAATAGATCGTGATTTTCCGGTATATGTCAAACTCGGGAATGGACAGAACTACTCTGGAGTTTCAATCAGTGATGGCAGTTTTCTACCTCGTACATTGGTGCCACTCATATACGCTGGAAATGCAAGCGTAAAAGTAGGTGCAGAGTTGTGTCTGACAGATAGCTTGGATCCAGAAAAGGTTAAGGGAAAAATTGTGTTCTGTGATCGTGGAAATATTTCAAGGGTGGAGAAAGGGCTTGTGGTGAAATCTGCTGGTGGTGTGGGCATGGTGTTAGCCAATGCAGAAATTGATGGAGAGGAATTAGTGGCGGATGTCCATCTTTTGCCAACAGCTGCAGTGGGTTTCAAAACCTCCAAAGCCATTAAGATGTACCTGCAACAGACACAAAATCCAACAGCTACACTTGTGTTCCAGGGAACTGAGGTTGGAATTCAGCCGTCGCCAATTGTTTCTGCATATAGTGCTCGAGGTCCAAACCCAATCACACCAGAAATATTGAAACCTGATTTCATTGCTCCTGGTACAAACATATTAGCCGCATTTACGCAATATGCAGGTCCCACAAACCTCGACCAGGATGATAGGCGTGTGGATTTTAACATAATCACAGGAACATCCATGTCATGTCCTCACGCCAGTGGTATAGGAGCTTTGATTAAATCGGTTTATCCAAATTGGAGCCCTGCTGCAATTCGGTCTGCGCTTGTAACCACAGCTTATGCGTCTTACAACAATGGTGAAAAACTATTAGACAGTGCCACAAATGCTCCTTCAACACCGTTTGCCGTCGGTGCCGGGCATGTGAACCCAATTCTCGCGCTTAATCCAGGACTTGTTTATGATTTAACAGCGGATGATTACCTGAACTTTCTCTGTGCATTAAACTACACACCAGATAGGATTGAAGCTGTGGCAAGGAGAAAGTTCAGCTGTGATGCACAGACGCACTACAGTGTAACAAGCTTAAATTACCCTTCGTTTGGAGTGGTGTTTAAACCAGTAGCAGGAAGCTCCGTTGCAACCATTATTCACGAGCGAACTCTTACCAATGTGGGGGTTGCAGGAACATACAAAGCATCGGTTACGTTGGATATCCCATCTGTGAATATCACTGTTGAGCCAAACGTGTTGAGTTTCAACAAAAATGAGAAAAAATCATACAAGATGACATTTACAACTCCGAATCCGCCAACACGAAGGCAAGTTGGTTTTGGACGTTTAGAATGGTCAAATGGAAAAACTATAGTCGGAAGTCCTATTTCAATTATCTGGGAATAA 2334 0.437 MFVPSPQTSKFSMKTFDKPVSAATFVFFLILCDVSLATIERKNDNEKSTYIVHVAKSEMPTILNHHSIWYRSILKSISDSAEMLYHYDNAIHGFSTRLTPEEARLLKSEIGILKVLPEKIYKPLTTRTPQFLGLDKIKDMFPESNATSDIIIGLLDTGVWPESKSFDDVELGPVPMSWKGKCESGQNFSAANCNRKLIGARFFLKGFEASVGPLNATQFRSPRDSDGHGTHTASTAAGSTVKDANLFGYASGVARGMVPRARIAIYKVCWQDNCVASDILAAMDAAISDNVNVISASLGGQAIDYDEENLAIGAFAAIEKGIVVVCAAGNDGPTNSTLQNVAPWMITVGAGTIDRDFPVYVKLGNGQNYSGVSISDGSFLPRTLVPLIYAGNASVKVGAELCLTDSLDPEKVKGKIVFCDRGNISRVEKGLVVKSAGGVGMVLANAEIDGEELVADVHLLPTAAVGFKTSKAIKMYLQQTQNPTATLVFQGTEVGIQPSPIVSAYSARGPNPITPEILKPDFIAPGTNILAAFTQYAGPTNLDQDDRRVDFNIITGTSMSCPHASGIGALIKSVYPNWSPAAIRSALVTTAYASYNNGEKLLDSATNAPSTPFAVGAGHVNPILALNPGLVYDLTADDYLNFLCALNYTPDRIEAVARRKFSCDAQTHYSVTSLNYPSFGVVFKPVAGSSVATIIHERTLTNVGVAGTYKASVTLDIPSVNITVEPNVLSFNKNEKKSYKMTFTTPNPPTRRQVGFGRLEWSNGKTIVGSPISIIWE* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0533 777 ProSitePatterns Serine proteases, subtilase family, serine active site. 556 566 IPR023828 -
Vra11g0533 777 ProSiteProfiles Serine proteases, subtilase domain profile. 131 626 - -
Vra11g0533 777 SUPERFAMILY Subtilisin-like 124 630 IPR036852 GO:0004252|GO:0006508
Vra11g0533 777 Pfam PA domain 396 473 IPR003137 -
Vra11g0533 777 PRINTS Subtilisin serine protease family (S8) signature 147 166 IPR015500 -
Vra11g0533 777 PRINTS Subtilisin serine protease family (S8) signature 224 237 IPR015500 -
Vra11g0533 777 PRINTS Subtilisin serine protease family (S8) signature 555 571 IPR015500 -
Vra11g0533 777 SUPERFAMILY PA domain 404 451 IPR046450 -
Vra11g0533 777 Pfam Fibronectin type-III domain 674 774 IPR041469 -
Vra11g0533 777 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 37 775 - -
Vra11g0533 777 Pfam Peptidase inhibitor I9 49 122 IPR010259 -
Vra11g0533 777 Gene3D Peptidase S8/S53 domain 149 639 IPR036852 GO:0004252|GO:0006508
Vra11g0533 777 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 33 123 IPR037045 -
Vra11g0533 777 Gene3D - 354 495 - -
Vra11g0533 777 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 775 IPR045051 -
Vra11g0533 777 CDD PA_subtilisin_like 360 487 - -
Vra11g0533 777 CDD Peptidases_S8_3 121 592 IPR034197 -
Vra11g0533 777 Gene3D - 643 775 - -
Vra11g0533 777 Pfam Subtilase family 148 616 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0533 Vra-Chr11 4071796 4074327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0533 27 776 Subtilisin-like Serine Gene Family AT5G67360 59.761 0.0 926
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0533 - - gmx:100801866 1228.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0533 11 4071796 4074327 Vra7g1212 7 28471646 28474392 PCT