Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0519 ATGGGTGAAGAGTTAAAACCTATGGTGTCTGTGAGAGAGTTCGATCCTGATAGAGACAGAGAGAGAGTAGAAGCTGTTGAAAGGATATGTGAAGTTGGACCCAGTGGCAAGCTTTCTCTCTTCACGGACATGCTCGGTGACCCAATTTGCAGGGTTCGCCATTCGCCTGCTTTTCTCATGCTGGTGGCGGAGATTGGTGAAGAGGTAGTAGGAATGATAAGAGGATGCATAAAAACGGTGACATGCGGAAAAAGACTATCCAGGAACGGAAAACACAATGCCAATAACACTAAGCATGTTCCGGTCTACACTAAAGTGGCCTACATACTAGGCCTTCGCGTTTCGCCTAATCAACGGAGAATGGGAATAGGGTTGAAGCTGGTGCACAGGATGGAGGCGTGGTTCAGGGATAATGGTGCCGAGTATTCCTACATGGCAACGGAAAACGACAATTTAGCTTCCGTTAAACTCTTCACCGACAAATGCGGGTATTCAAAGTTCCGTACCCCGTCCATTCTTGTCAACCCCGTTTTCGCCCACAGGGCAAGGGTGTCCCCCAAGGTCACAATCATTAGCCTTTCCCCTTCCGACGCGGAGGTTCTCTACCGTCGCCGTTTCGCCACGACGGAGTTCTTCCCGCGCGACATTGACTCCGTCCTGAAGAACAAGCTGAGTCTGGGGACGTTTCTGGCGGTCCCGGGTGGGTCCTACAGTGCCGAGACATGGCCCGGGCCAGATCTTTTCCTGTCGGACCCACCCAAGTCGTGGGCCTTGGTGAGCGTGTGGAACTCTAAGGAGGTGTTCACGCTCGAGGTGCGAGGCGCGTCGCGCGTGAAGCGCACGCTGGCGAAGACGACGAGGGTGGTGGACCGGGCCCTGCCGTGGCTGCGGGTACCGTCGATCCCGGATTTGTTCAGGCCATTCGGGTTTCACTTCATGTACGGGCTTGGAGGGGAAGGCCCAGATGCAGCGAAGATGGTGAAGGCCCTTTGTGGGTTCGCGCACAACCTCGCGATGGAAAAAGGTTGCAGGGTGGTGGCCACTGAAGTATCACCAAACGAGCCCTTACGGTCCGGTATACCCCACTGGAAGATGCTGTCTTGTGACGAAGATTTATGGTGTATGAAGCGGTTGGGTGAGGATTACAGTGACGGTTCCGTTGGTGACTGGACCAAATCTCAACCCGGAATGTCCATTTTTGTTGACCCGAGAGAGGTCTAA 1221 0.5397 MGEELKPMVSVREFDPDRDRERVEAVERICEVGPSGKLSLFTDMLGDPICRVRHSPAFLMLVAEIGEEVVGMIRGCIKTVTCGKRLSRNGKHNANNTKHVPVYTKVAYILGLRVSPNQRRMGIGLKLVHRMEAWFRDNGAEYSYMATENDNLASVKLFTDKCGYSKFRTPSILVNPVFAHRARVSPKVTIISLSPSDAEVLYRRRFATTEFFPRDIDSVLKNKLSLGTFLAVPGGSYSAETWPGPDLFLSDPPKSWALVSVWNSKEVFTLEVRGASRVKRTLAKTTRVVDRALPWLRVPSIPDLFRPFGFHFMYGLGGEGPDAAKMVKALCGFAHNLAMEKGCRVVATEVSPNEPLRSGIPHWKMLSCDEDLWCMKRLGEDYSDGSVGDWTKSQPGMSIFVDPREV* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0519 406 Gene3D - 9 173 - -
Vra11g0519 406 Pfam Acetyltransferase (GNAT) family 54 164 IPR000182 GO:0016407
Vra11g0519 406 PANTHER N-ACETYLTRANSFERASE 9 405 - -
Vra11g0519 406 CDD NAT_SF 60 142 - -
Vra11g0519 406 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 166 IPR016181 -
Vra11g0519 406 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 183 IPR000182 GO:0016407
Vra11g0519 406 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 9 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0519 Vra-Chr11 3929369 3931359 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vra11g0519 Acetyltransf_1 3.4e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0519 - - gmx:100800613 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0519 11 3929369 3931359 Vra7g1227 7 28679686 28682294 PCT