Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0501 ATGGCACGTTCCTTATGCCCATCCCTTCCGAACACTTCCACCTTCTCTGATTTCCGCAAACTATACTCTTCCTCTCACCATTTGTGTTTCCACTCCCCAAAATCAAACCTGCAATTTAAGCCTCGTCGGGGCCCAGAAGCGCGGCCCCTGGGTAACCGAAAGAAGGGAAGTTCGAAGAAGTTTACTGCGTCGAGCGAAGGAGCGAATGGTTATGGGAGTATAGAAGCCGAGGGGTATAATGGGTCGGTGGAAGATAAGCAATTCGTGCGTTCCTTTCGCGAGGCCTGGCCTTACTTGTGGGCCTATCGTGGCAGCACCTTCGTTGTCATTATTTCTGGAGAAATTGTTTCTAGTCCTTTCCTAGATCCTATTCTCAAGGACATAGCTTTCCTTCATCAGCTAGGTATCCGGTTTGTTCTTGTTCCGGGGACACATGTGCAGATAGACAAGCTTCTGAATGAGAGAGGTTGCCAGCCTAAGTATGTTGGTAGATATAGGATAACTGATGAAGCATCTCTAGAAGCTGCGATGGAAGCCGCTGGGGGAATAAGATTGATGATCGAAGCAAAACTTTCTCCTGGACCTTCCATATGCAATATTCGTCGACATGGCGATAATAGTCGATGGCATGAAGTGGGTGTCAGTGTTGCCAGTGGTAACTTTCTTGCAGCCAAGAGAAGAGGGGTGGTCAATGGAATTGATTTTGGGTCAACTGGGGAAGTTAAAAAAGTAGACGTATCTCGCATGCGTGAGAGACTTGATGGTGGTTGTGTAGTTATTTTAACCAACTTGGGCTACTCCAGCTCTGGAGAAGTATTAAATTGCAACACCTATGAAGTAGCAACAGCTTGTGCCTTGGCTATAGGAGCGGACAAGTTGATATGCCTTATAGATGGTCCAATACTTGATGAGAATGGACGTTTAATTCGTTTCTTGCCTCTTCAAGAAGCAGACATGCTAATTCGTAAAAGGGCTGAGCAAAGTGAAGTAGCTGCTAACTATGTCAAAGTTGTTGATGAAGAAGGTTTCAACTCTCCTGAATATAACAATTTTAATGGAATAGTCAAATCACCACCTATTGGGCGTTTTACAGAATGGCATAAAGCAACCTTCCATAACGGTGTTGGTTTTGAAAATGGAAATGGCTTAGAGTCCAGTGAGCAAGGTTTTGCCATTGGAGGTCAAGAGCGGTTAAGTCGAATGCACGGTTACCTGTCAGAGTTGGCTGCTGCTGCTTTTGTTTGCAGAGGTGGTGTTCAAAGAGTTCACTTGCTGGATGGAACTATTAGTGGAGTTTTGTTGTTGGAATTGTTTAAAAGAGACGGGATGGGAACAATGGTGGCTAGTGACCTTTATGAAGGCACTCGGACAGCAGAGGTGAAAGATATTTCTGGAATAAAACAACTTATTCAGCCTTTGGAGGCATCTGGCATATTGGTTAAGCGGACTGATGAAGAGCTCTTGCAAACATTGGATTCATTCGTTGTTGTGGAAAGAGAAGGTCACATAATTGCCTGTGCCGCCCTTTTTCCTCACTTTGAGGAGAAGTGCGGGGAAGTTGCTTGCATTGCAGTATCTCCTGATTGTCGTGGCCAAGGACAGGGTGACAAATTGCTTGATTATATGGAGAAGAAAGCATCGTATCTGGGACTGAATATGCTTTTCCTGCTAACTACCCGTACAGCAGATTGGTTTGTGAGGCGTGGATTTTCAGAATGTTCTATTGATTATATTCCTGAAAAGAAAAGGAGAAAGATCAATCTTTCTCGCAATTCTAAGTATTATATGAAGAAGCTTCTACCAAATAAAAGTGGAATTACTGTTGGTGTAAAATCTGATTCAAGTTAG 1848 0.4394 MARSLCPSLPNTSTFSDFRKLYSSSHHLCFHSPKSNLQFKPRRGPEARPLGNRKKGSSKKFTASSEGANGYGSIEAEGYNGSVEDKQFVRSFREAWPYLWAYRGSTFVVIISGEIVSSPFLDPILKDIAFLHQLGIRFVLVPGTHVQIDKLLNERGCQPKYVGRYRITDEASLEAAMEAAGGIRLMIEAKLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGIDFGSTGEVKKVDVSRMRERLDGGCVVILTNLGYSSSGEVLNCNTYEVATACALAIGADKLICLIDGPILDENGRLIRFLPLQEADMLIRKRAEQSEVAANYVKVVDEEGFNSPEYNNFNGIVKSPPIGRFTEWHKATFHNGVGFENGNGLESSEQGFAIGGQERLSRMHGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRTAEVKDISGIKQLIQPLEASGILVKRTDEELLQTLDSFVVVEREGHIIACAALFPHFEEKCGEVACIAVSPDCRGQGQGDKLLDYMEKKASYLGLNMLFLLTTRTADWFVRRGFSECSIDYIPEKKRRKINLSRNSKYYMKKLLPNKSGITVGVKSDSS* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0501 615 MobiDBLite consensus disorder prediction 36 67 - -
Vra11g0501 615 PANTHER AMINO-ACID ACETYLTRANSFERASE 53 606 IPR010167 GO:0004042|GO:0005737|GO:0006526
Vra11g0501 615 Pfam Amino acid kinase family 107 322 IPR001048 -
Vra11g0501 615 SUPERFAMILY Carbamate kinase-like 401 449 IPR036393 -
Vra11g0501 615 SUPERFAMILY Carbamate kinase-like 86 322 IPR036393 -
Vra11g0501 615 TIGRFAM N-Ac-Glu-synth: amino-acid N-acetyltransferase 408 599 IPR010167 GO:0004042|GO:0005737|GO:0006526
Vra11g0501 615 CDD AAK_NAGS-ABP 87 447 IPR033719 -
Vra11g0501 615 Gene3D - 86 452 IPR036393 -
Vra11g0501 615 Hamap Amino-acid acetyltransferase [argA]. 87 599 IPR010167 GO:0004042|GO:0005737|GO:0006526
Vra11g0501 615 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 453 601 IPR000182 GO:0016407
Vra11g0501 615 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 456 603 IPR016181 -
Vra11g0501 615 Pfam Acetyltransferase (GNAT) family 490 558 IPR000182 GO:0016407
Vra11g0501 615 CDD NAT_SF 494 556 - -
Vra11g0501 615 Gene3D - 453 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0501 Vra-Chr11 3784202 3791346 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vra11g0501 AA_kinase 1.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0501 K14682 - gmx:100777694 978.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0501 11 3784202 3791346 Vra7g1242 7 28832788 28839866 PCT