Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0491 ATGCTTTCTCATCTTACCTCTTCCGATTCTATGCTGGGAAATGCATTCCCCGCGTTCGACTATGCTCTCACGCCCTGGGATGGGCCTGATTTTTTGCCCTTCAACCCCACTAGCCCCAACCCCGTCACCTCCAGTTCCGCTTCGGACGACCCCAAAACAACCCCTGCCCACCAAAAACCGCCCTCGGACCAGTCCAACCGGGTTGTGTCCCTCATGGAGGAGCGAAAACGCAGGAGAATGATATCGAACCGGGATTCGGCCCGAAGGTCACGCATGCGTAAACAGAGACACCTAGAGAACTTACGGAACCAGATGAACCTGTTTCGGGTTGAAAACCGGGAACTGAACAACGGGTTTCAGTTCCTCCTTCACCACTGTAACCGTCTACGAACCGAAAACGAGTGGCTCCGGTCCGAACGAACCATGCTCCGGCAAAAACTGGCCGACATAAATCAAATTTTGCTCTTCCGACAATTGCAACCATTTTCCACTGCATGGCCGTGCAATATTGTCATGGCAGAATAA 525 0.5257 MLSHLTSSDSMLGNAFPAFDYALTPWDGPDFLPFNPTSPNPVTSSSASDDPKTTPAHQKPPSDQSNRVVSLMEERKRRRMISNRDSARRSRMRKQRHLENLRNQMNLFRVENRELNNGFQFLLHHCNRLRTENEWLRSERTMLRQKLADINQILLFRQLQPFSTAWPCNIVMAE* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0491 174 Gene3D - 73 149 - -
Vra11g0491 174 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 73 136 IPR004827 GO:0003700|GO:0006355
Vra11g0491 174 PANTHER BZIP TRANSCRIPTION FACTOR 26 174 - -
Vra11g0491 174 PANTHER BZIP TRANSCRIPTION FACTOR 44 26 174 - -
Vra11g0491 174 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 78 93 IPR004827 GO:0003700|GO:0006355
Vra11g0491 174 Pfam bZIP transcription factor 75 134 IPR004827 GO:0003700|GO:0006355
Vra11g0491 174 MobiDBLite consensus disorder prediction 37 68 - -
Vra11g0491 174 SMART brlzneu 71 135 IPR004827 GO:0003700|GO:0006355
Vra11g0491 174 CDD bZIP_plant_GBF1 76 127 IPR045314 GO:0003700|GO:0006355
Vra11g0491 174 MobiDBLite consensus disorder prediction 32 68 - -
Vra11g0491 174 SUPERFAMILY Leucine zipper domain 75 127 IPR046347 GO:0003700|GO:0006355
Vra11g0491 174 Coils Coil 84 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0491 Vra-Chr11 3702486 3703453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0491 10 158 bZIP Transcription Factor Family AT3G49760 34.899 8.12e-29 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vra11g0491 bZIP_1 2.7e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0491 - - gmx:102661188 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0491 11 3702486 3703453 Vra7g1254 7 29027489 29028876 PCT