Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0463 ATGGGAAGCAATGGACTCTGCAATCTCTTTTCATGCTTCAAGGCATCTTCCAATCATGGCCATGGTGGTCATGGTGGCCATGGTGGCCATGGCCATAACCATAACCAGAGCCAGTTGGTTTTTGCGGAGACAGAGCCATTGGACGAAACCCTAGGCCACTCTTTCTGCTACGTCAGATCCTCCGCGCGCTTTCTCTCTCCCTCTCATTCCGATCGCATCCTCTCACCCTCCAACTCTCTCCGCTTCTCCCCTTCTCATCGCTCCGATTTTCCCGAAACGGCATTCAAGGCCATTTCCGGAGCCTCGGTCAGCGCCAACAGCTCCGTGCCCAAAACCGTGCTCCAGTCCCAGGATGACGACACCAACGTCAATGGCTTCAGAGGAACGGCTTCCTTCAGCGCTCTCCCTCTGCAGCCCGCTCCCAGAGGAGGAGAAACTGCTCCCTCTGAGAGAGAGCGGAGGGCGTTCTTTCTCTCGGGGCCAATTGAGAGCGGCGCGCTCTCGGGACCCCTCGACGACGCCGTTTCTAGCTCTGGGGGAGTGCCCTTCTCTGCTCCGCTCGGTGGTGGAGTGTATGTGAAGAAGAAGCGGAAGAAGAGCATTGCCGGGTTGAGAAAGGCCTTCCAGCGGAGTCTCTCCGAGAAGAAGCGGCCTTGGGTGGTGCCTGTGGGGCGGAAGGGGAAGACGGAAGCGACGAGTGAGACGGAGAACGAGAGCAATGTGCAGTGGGCGCTGGGAAAAGCGGGGGAGGATCGTGTGCATGTCGTTGTATCGGAAGAACAGGGTTGGTTGTTCGTAGGGATATACGACGGTTTCAATGGCCCTGATGCGCCAGAGTTTCTCATGGGTAATCTTTACCGTGCCCTTCACAAGGAGCTCCAGGGTTTGTTTTGGGAACTTGAAGAACCGCAGTCGCAGGTGCAGGGAACTAACCCTGCACCTGAGCTGGAGGATAATGAAGCTGAACCCCGGAATGAGGTGGAGGTGGAGGTGGAGGAAGACTCCAGTTCTCTCCGAGGATCGGTTAAGAGAGTGACGTTTCAAGCGGAGGGGACTGAGAGTAGGAGGAGAAGGCTGTGGGAGTTTTTGGCTGAGGAGGATGATGCGGAGAACGGGCTCGATCTTTCCGGGTCTGATAGGTTTGCGTTTTCGGTTGATGATGCGCTCAGTGCTAGCAAGGAGGGCTCGGGAGGTAGTAGACGGTGGTTAATTTTGTCTAAGTTGAAGCATGGGTTGTCGAGGCATAAAGAGGGTCACGGGAGGAGGTTGTTGCCGTGGAGCTTGGGCGTGGGGGAGGAGAAGGAGAAGGTTGAAGTGGAAAATCCAACGACGGCAGAGGAGGAGGAGGAGGAGGAGAAGGGTCACGGTGGGAGGAAGCGAAAAGAGGGGCCAGTGGATCATGAGTTGGTTTTGGGAGCGTTGTCTAGGGCGCTTGAGATGACTGAGCTTGCATATTTGGATATGACGGATAAGCTAATTGATACCAATCCGGAGCTTGCTCTGATGGGGTCGTGTCTGTTGGCTGTGTTGATGAGGGATGAGGATGTTTATGTTATGAACGTGGGGGATAGCCGCGCCATTGTGGCACATTATGAGTGTGAGGAGGTTCACGCTACTAGTAAGGAAACGGGAAATGGTGGAGGCATTGGGTCAAGCGGGGAGTGCATAGTGGAGGAGTCTTCGGCTCCAGACGAAGGTGGTGTCGTGTTAGGGAATGAGGGTCCTGCTAGGGAACGGAGGTTGGTTGCATTGCAGCTGTCCACTGATCACAGCACCAGCATTGAAGAGGAAGTTGTTAGAATTAAGAATGAGCATCCTGATGATAGCCATTGTATTGTGAATGATAGAGTGAAAGGCCGTCTTAAGGTTACTAGAGCTTTTGGTGCTGGATTTTTGAAACAGCCAAAGTGGAATGATGTGGTGCTAGAAATGTTTCGTAATGAATATATTGGCACTGCTCCATATATATCCTGCTTCCCTTCATTACGTCACCATAGATTATGCCCTAGAGATCAGTTCTTGATCCTCTCATCTGATGGTTTGTATCAATACCTAAGCAATCAAGAAGTGGTTTCTCAGGTCGAGAGCTTTATGGAAAAGTTTCCGGATGGAGATCCTGCCCAGCATTTAATAGAGGAGCTGCTCCTACGTGCTGCCAAGAAGGCTGGAATGGATTTCCATGAGTTGCTGGATATACCTCAAGGAGATCGGAGGAAGTATCATGATGATGTGACTGTAATGGTGATATCACTTGAAGGAAGAATCTGGAAGTCATCAGGGAAGTATCCATGA 2292 0.5249 MGSNGLCNLFSCFKASSNHGHGGHGGHGGHGHNHNQSQLVFAETEPLDETLGHSFCYVRSSARFLSPSHSDRILSPSNSLRFSPSHRSDFPETAFKAISGASVSANSSVPKTVLQSQDDDTNVNGFRGTASFSALPLQPAPRGGETAPSERERRAFFLSGPIESGALSGPLDDAVSSSGGVPFSAPLGGGVYVKKKRKKSIAGLRKAFQRSLSEKKRPWVVPVGRKGKTEATSETENESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGNLYRALHKELQGLFWELEEPQSQVQGTNPAPELEDNEAEPRNEVEVEVEEDSSSLRGSVKRVTFQAEGTESRRRRLWEFLAEEDDAENGLDLSGSDRFAFSVDDALSASKEGSGGSRRWLILSKLKHGLSRHKEGHGRRLLPWSLGVGEEKEKVEVENPTTAEEEEEEEKGHGGRKRKEGPVDHELVLGALSRALEMTELAYLDMTDKLIDTNPELALMGSCLLAVLMRDEDVYVMNVGDSRAIVAHYECEEVHATSKETGNGGGIGSSGECIVEESSAPDEGGVVLGNEGPARERRLVALQLSTDHSTSIEEEVVRIKNEHPDDSHCIVNDRVKGRLKVTRAFGAGFLKQPKWNDVVLEMFRNEYIGTAPYISCFPSLRHHRLCPRDQFLILSSDGLYQYLSNQEVVSQVESFMEKFPDGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYP* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0463 763 SMART PP2C_4 234 749 IPR001932 -
Vra11g0463 763 MobiDBLite consensus disorder prediction 303 335 - -
Vra11g0463 763 ProSiteProfiles PPM-type phosphatase domain profile. 231 751 IPR001932 -
Vra11g0463 763 MobiDBLite consensus disorder prediction 106 131 - -
Vra11g0463 763 PANTHER PROTEIN PHOSPHATASE 2C 29 32 761 - -
Vra11g0463 763 MobiDBLite consensus disorder prediction 433 464 - -
Vra11g0463 763 Gene3D - 206 758 IPR036457 -
Vra11g0463 763 MobiDBLite consensus disorder prediction 448 464 - -
Vra11g0463 763 MobiDBLite consensus disorder prediction 106 149 - -
Vra11g0463 763 CDD PP2Cc 454 751 IPR001932 -
Vra11g0463 763 SUPERFAMILY PP2C-like 247 752 IPR036457 -
Vra11g0463 763 Pfam Protein phosphatase 2C 569 719 IPR001932 -
Vra11g0463 763 PANTHER PROTEIN PHOSPHATASE 2C 32 761 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0463 Vra-Chr11 3437811 3443346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0463 1 762 PP2C-type Phosphatase Gene Family AT2G35350 56.553 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0463 - - gmx:100775371 1277.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0463 11 3437811 3443346 Vra7g1290 7 29667951 29672707 PCT