Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0460 ATGATGTTTCTGCATTCTTTGTGGTTCATCCTATTTGCAGCTTTGTTGGGTGGATATGCTTTTGTCTTTGGATTTCTTTGGAGAGTGAATGAATGGTACTATGTTTCAAGGGTGAGAAGAAACATGCAACACCCTCTTCCACCTGGTCATCTGGGTTGGCCTTTCTTGGGGAACATGCTCACCTTCTTCAAAGCTTTCAAATCTGATCCTGATTCTTTTATCTATGATCTTGTTTTCAGATATGGCAGGACTGGTATGTACAGAACATTCTTATTTGGAAGCCCTAGCATCATCGTGTGCACCCCAGAAACATGTCGTAGGGTTCTCACAGATGATGAACAACTGAAGCTTGGATACCCTGCTTCCACCACCTCCCTCTTTGGAAAGAGATCGTTCCATGGCATCTCAAATGAGGAACACAAGCGTCTTCGTCGTTTAACCACCTCTCCCATAACTGGCCACGAGGCATTGTCCATGTACGTAGGTCTCATAGAAGATGCTTCTGTCAAAGTGCTGGAAGAGTTGTCTAGCATGAGCACTCCTTCTGAGTTCCTCACAGAGTTGAGAAAGTTCGCTTTTAAGATCATCACCACCATTTTCATGGGCTCTGATTTTCACCATGTGGATCTTGGCTTGGTCGAAAACTTGTACAGAGATTTCAGTCGTGGAATTAAGTCACTGCCTATCAACCTCCCAGGCTTTGCTTTCTATAAAGCAGTCAAGGCACGAAAGAAGTTGACGAAGTTGCTGCAAGGTGTGGTGGAGCTAAAGAGAAGGAGCAACAGTAGAAAAAGAAAGACGAAAAGGGATATGATGGATTCATTGATGGAAGTGAAAGATGAAGAGGGTAAGCAGCTGGAGGATGAAGACATTATAGACTTACTTCTGGTGTTCTTGTTAGCTGGCCATGAAAGTTCTGCTCATGGAATATTGTGGACTATCATCTACCTCACACAACACTCACATTTCTTCCAAAGGGCTAAGAAAGAACAAGAAGAGATCATGCAAGCAAGACCCTCCACTCAGAAAGGACTGAACATAAAGGAAATTAAGCAAATGGAATATCTTTCAAAGGTTATCCAAGAGATGCTGCGCAAAACATCTATCTCGTTTGCGAATTTTAGACAGGCAAAGGTTGACCTCAGCATCAATGGTTTTACTATACCAAAAGGATGGAAAGTTCTGGTTTGGAACCGAGGGGTGCATATGGACCCTGAAACTTACAACAATCCAAAGGAATTCGATCCTTCCAGATGGGAAAATCACACAGCAAGAGCAGGTTCTTTTATTCCATTTGGATTAGGAAGCAGATTTTGTCCTGGGAGCGACCTTGCCAAACTAGAGATCACTATTTTCCTCCATCATTTTCTTCTTAACTACAGGATGGAGAGAGTTAACCCAGATTGTCCAATCACATATCTACCATTGCAAAGGCCCTTAGATAACTGCTCTGCAAGAATTGTAAAACTCACATAA 1476 0.4262 MMFLHSLWFILFAALLGGYAFVFGFLWRVNEWYYVSRVRRNMQHPLPPGHLGWPFLGNMLTFFKAFKSDPDSFIYDLVFRYGRTGMYRTFLFGSPSIIVCTPETCRRVLTDDEQLKLGYPASTTSLFGKRSFHGISNEEHKRLRRLTTSPITGHEALSMYVGLIEDASVKVLEELSSMSTPSEFLTELRKFAFKIITTIFMGSDFHHVDLGLVENLYRDFSRGIKSLPINLPGFAFYKAVKARKKLTKLLQGVVELKRRSNSRKRKTKRDMMDSLMEVKDEEGKQLEDEDIIDLLLVFLLAGHESSAHGILWTIIYLTQHSHFFQRAKKEQEEIMQARPSTQKGLNIKEIKQMEYLSKVIQEMLRKTSISFANFRQAKVDLSINGFTIPKGWKVLVWNRGVHMDPETYNNPKEFDPSRWENHTARAGSFIPFGLGSRFCPGSDLAKLEITIFLHHFLLNYRMERVNPDCPITYLPLQRPLDNCSARIVKLT* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0460 491 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0460 491 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0460 491 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0460 491 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0460 491 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0460 491 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0460 491 Gene3D Cytochrome P450 35 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0460 491 PANTHER CYTOCHROME P450 88D6 23 468 - -
Vra11g0460 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Vra11g0460 491 Pfam Cytochrome P450 47 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0460 491 PANTHER CYTOCHROME P450 26 23 468 - -
Vra11g0460 491 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0460 491 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0460 491 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0460 491 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0460 491 SUPERFAMILY Cytochrome P450 45 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0460 Vra-Chr11 3411016 3413514 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0460 7 487 Cytochrome P450 AT1G05160 52.761 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0460 K04123 - gmx:100775911 676.011