Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0456 ATGGAGAGTATGCCGCTCACACTCTTCTTGATGGGTATTTTGTTAAATGCTACAACTCTAAGTGGAGTGAAACTTCTTGTTCATGACTACTACGAGGAGAAGTGTCCCTTAGCCGAAGACATCGTCAGACATAACGTGGAGGTGGCACTTTTGAACAATCCTCGTTTGGCAGCCTCTCTACTTCGCTTACACTTCCACGATTGTTTTGTCATGGGTTGTGATGCATCGGTGCTTCTGGACAGCGTGGAGGGCATGCCAAGTGAAAAACTGGCCGGGCCAAATGTGAACTCTTTACATGGGTTTGAGTTGATAGACAAGATAAAGTATTTGCTGGAAGAGGAATGTCCTATTACCGTTTCATGTGCAGACATCCTTGCCATGGCTGCACGTGATGCAGTTCAATTGAGAGGAGGGCCAAGATGGGAGGTTTTGCTAGGGAGGAAGGATTCTCTGGAGTCAAGTTTCAGTGGAGCTAACCTTTTCATTCCTGCTCCAAATTCCTCTCTAGAGGTTCTCATAGATAACTTCAAGCAACAAGGCCTTGACATAGAAGACTTGGTAACTCTATCAGGTAGCCATACTATAGGAAGAGCAAGATGTCTAAACTTCAGGCAGAGGATATATGAAGCAGAAGATGAATATCACCATGGCAATGATCGCTACAAGCGATACACAACCTTCAGGAGAATTCTTAGGTCCATTTGCCCTGTTGAGGGAAGGGACAACAAATTTGCACCCCTTGATTTGCAGACCCCAAAAAGGTTTGACAATCAGTATTTTATAAACATTCTTGGAGGTAATGGCTTGTTAGGTTCTGATAATGTTCTTACCAGCCAGGATTTGGATGGAAAGATTACAGAGCGTGTTTGGGCTTATGCCTCCAACGAGAAACTTTTCTTTGCTTCATTTGCTAAATCTATGATTAAGATGGGAAATATCAATGTTCTTACAGGTGATGAAGGAGAAATTAGGAGGAATTGTAGATTTGTCAATGCCTAG 999 0.4314 MESMPLTLFLMGILLNATTLSGVKLLVHDYYEEKCPLAEDIVRHNVEVALLNNPRLAASLLRLHFHDCFVMGCDASVLLDSVEGMPSEKLAGPNVNSLHGFELIDKIKYLLEEECPITVSCADILAMAARDAVQLRGGPRWEVLLGRKDSLESSFSGANLFIPAPNSSLEVLIDNFKQQGLDIEDLVTLSGSHTIGRARCLNFRQRIYEAEDEYHHGNDRYKRYTTFRRILRSICPVEGRDNKFAPLDLQTPKRFDNQYFINILGGNGLLGSDNVLTSQDLDGKITERVWAYASNEKLFFASFAKSMIKMGNINVLTGDEGEIRRNCRFVNA* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0456 332 ProSiteProfiles Plant heme peroxidase family profile. 25 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra11g0456 332 PANTHER PEROXIDASE 72-RELATED 10 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g0456 332 Gene3D Peroxidase, domain 2 163 311 - -
Vra11g0456 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Vra11g0456 332 SUPERFAMILY Heme-dependent peroxidases 27 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vra11g0456 332 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Vra11g0456 332 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g0456 332 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g0456 332 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g0456 332 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g0456 332 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g0456 332 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g0456 332 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g0456 332 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g0456 332 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra11g0456 332 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra11g0456 332 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra11g0456 332 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra11g0456 332 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra11g0456 332 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra11g0456 332 PANTHER PEROXIDASE 20 10 331 - -
Vra11g0456 332 Gene3D - 30 331 - -
Vra11g0456 332 CDD secretory_peroxidase 26 330 IPR033905 GO:0004601|GO:0042744
Vra11g0456 332 Pfam Peroxidase 43 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0456 Vra-Chr11 3368060 3370085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0456 85 331 Peroxidase AT2G35380 65.992 1.12e-119 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0456 K00430 - gmx:100778051 588.956