Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra11g0430 | ATGAACTGTTTGTTCTTCAAAAAGAAATCAAAATCCCACCCAGAACTCCCAAAGGGACGGAAGAAGAAAAGCCAGGTTGTGAATGGAGCACCCAAGTCCCCAAGCTCGGTACCATCGCCGAGGAGCATAAAAGAATTGTACAGAGAGAAGGAACAGAGTTACAGAATTTTCAGTTTAAAAGAGCTTGTAGATGCAACAAATGGTTTCAATAGCATGCTGAAGATTGGAGAAGGTGGTTTTGGAAAAGTATATAGAGGAACCATCAGTCCTAAAGATGGAGCTGCTCCAATTGTAGTCGCAATAAAAAAACTTAACGCGCATGGCTTACAGGGACATAAAGAATGGCTAGCGGAAGTTCAATTTCTGAGCGTTGCCAACCACCCTAATTTGGTCAAGCTTCTGGGATACTGCTCAATAGACAGTAAAAGAGGAATCCAACGGTTGTTGGTATATGAGTTCATGTCTAACAGGAGTCTGGAAGATCATCTTTTCAGTGTTTCTTTACCTCCTTTGCCTTGGCCAACAAGATTGCAGATCATGCTCGGTGCTGCTCAAGGATTGTATTATCTCCACAACGGATTGGAGATTCAGGTGATCTACCGAGATTTCAAATCTTCAAATGTGTTGCTGGACAAGCAATTTCATCCCAAACTTTCAGATTTTGGTCTTGCAAGAGAGGGTCCTACAGGTGACAAGACTCATGTATCTACTGCGGTAGTGGGGACACAGGGATATGCTGCCCCAGAGTATGTTCAAACGGGTCATCTGAAAGTTCAGAGTGATATTTGGAGTTTTGGTGTGGTGCTTTATGAGATCCTGACAGGGAGACGTGCATTGAATAGAAACCGTCCAATAGGAGAACAAAAGCTTGTAGAATGGGTTAAACATTATCCTGCCAACAGTAGCAGGTTCAGCACCATCATCGACCGACGTCTCAATAACCAATACTCTCTTGCTGCAGCTCGGAAAGTAGCCAACTTGGCAGATCGCTGCTTGAAGAAGAATCCTCAAGACAGACCCTCCATGAATCAGATAGTGGAAACCTTGAACCAAGCATTGCAGGATTCACAAACCCAAAACACTTCACCTAATAACACTTCTAAATCCACACCATCCAGATTGCTCTCAACTACTCAATAA | 1140 | 0.4333 | MNCLFFKKKSKSHPELPKGRKKKSQVVNGAPKSPSSVPSPRSIKELYREKEQSYRIFSLKELVDATNGFNSMLKIGEGGFGKVYRGTISPKDGAAPIVVAIKKLNAHGLQGHKEWLAEVQFLSVANHPNLVKLLGYCSIDSKRGIQRLLVYEFMSNRSLEDHLFSVSLPPLPWPTRLQIMLGAAQGLYYLHNGLEIQVIYRDFKSSNVLLDKQFHPKLSDFGLAREGPTGDKTHVSTAVVGTQGYAAPEYVQTGHLKVQSDIWSFGVVLYEILTGRRALNRNRPIGEQKLVEWVKHYPANSSRFSTIIDRRLNNQYSLAAARKVANLADRCLKKNPQDRPSMNQIVETLNQALQDSQTQNTSPNNTSKSTPSRLLSTTQ* | 380 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra11g0430 | 379 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
Vra11g0430 | 379 | PANTHER | OS01G0588500 PROTEIN-RELATED | 9 | 358 | - | - | |
Vra11g0430 | 379 | MobiDBLite | consensus disorder prediction | 354 | 379 | - | - | |
Vra11g0430 | 379 | PANTHER | RECEPTOR-LIKE KINASE PLANT | 9 | 358 | - | - | |
Vra11g0430 | 379 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 198 | 210 | IPR008271 | GO:0004672|GO:0006468 | |
Vra11g0430 | 379 | Gene3D | Phosphorylase Kinase; domain 1 | 49 | 153 | - | - | |
Vra11g0430 | 379 | SUPERFAMILY | Protein kinase-like (PK-like) | 51 | 349 | IPR011009 | - | |
Vra11g0430 | 379 | ProSitePatterns | Protein kinases ATP-binding region signature. | 75 | 103 | IPR017441 | GO:0005524 | |
Vra11g0430 | 379 | CDD | STKc_IRAK | 75 | 351 | - | - | |
Vra11g0430 | 379 | Pfam | Protein tyrosine and serine/threonine kinase | 74 | 349 | IPR001245 | GO:0004672|GO:0006468 | |
Vra11g0430 | 379 | Gene3D | Transferase(Phosphotransferase) domain 1 | 154 | 374 | - | - | |
Vra11g0430 | 379 | ProSiteProfiles | Protein kinase domain profile. | 69 | 353 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra11g0430 | Vra-Chr11 | 3119184 | 3121421 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra11g0430 | 1 | 349 | Glycoside Hydrolase | AT3G07070 | 42.659 | 5.17e-94 | 285 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Vra11g0430 | PK_Tyr_Ser-Thr | 1.9e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra11g0430 | - | K00924 | gmx:100305390 | 602.053 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vra11g0430 | 11 | 3119184 | 3121421 | Vra11g0430 | 11 | 3119184 | 3121421 | ECH | |
Vra11g0430 | 11 | 3119184 | 3121421 | Vra7g1317 | 7 | 30062942 | 30066731 | PCT |