Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra11g0425 | ATGGAAGAAGAACGATACGAGACTCTGAAGGAGCTTGGTTCGGGGAACTTTGGAGTGGCAAGGTTGGCCAAAGACAAGAAGACAGGGGAACTTGTTGCTATCAAATACATAGAAAGAGGAAAAAAGATTGATGCGAATGTCCAAAGGGAGATAGTAAACCACCGATCTCTAAGGCATCCGAATATTATTAGGTTCAAAGAGGTATTTCTGACCCATACTCATTTAGCTATTGTCTTGGAGTATGCTGCTGGAGGTGAACTCTTCGAGAGGATATGCAATGCTGGTCGATTGAGTGAAGATGAGGCAAGATTTTTCTTCCAGCAACTAATATCTGGAGTTAGCTATTGTCATTCCATGCAAATATGTCATAGAGATCTGAAATTGGAAAACACTCTACTTGACGGAAATCCAGCTCCTAGACTTAAAATTTGTGACTTTGGTTTCTCCAAGTCTGCTTTGCTGCACTCTCAGCCTAAGTCAACGGTTGGAACTCCTGCATACATTGCTCCAGAAGTTTTGTCACGAAAGGAATATGATGGAAAGATTGCAGATGTTTGGTCGTGTGGTGTGACTCTTTATGTGATGTTAGTTGGAGCATACCCATTTGAAGATCCAGAAGATCCTAAGAATTTCAGAAAGAGTATTGGGAGAATTATGAGTGTTCAATACGCCATACCCGACTACGTTCGTGTTTCTAAGGAGTGCAGGCATCTTATCTCTTCTATTTTTGTTGCTAATCCTGCCAAGAGGATCACCATGTCGGAGATAAAACAACACCTTTGGTTTAGGAAGAACTTGCCGAGGGAGATAATTGAGGCTGAAAGAAGGGGTTACGAGGAAACACAAAAGGACCAACCAAGCCAAAGTGTGGAAGAAATAATGCAGATCATCGAAGAAGCAAGGACAAAAATTCACACTCGTGAGCAAACTTCGACAGGATCGTCGAACGTTGTACATGTTGATGAGGCTAACGAGGAAGTTGATGACCACTTTGCCAAAAATCTAGTCCTTGAGTAA | 1017 | 0.4199 | MEEERYETLKELGSGNFGVARLAKDKKTGELVAIKYIERGKKIDANVQREIVNHRSLRHPNIIRFKEVFLTHTHLAIVLEYAAGGELFERICNAGRLSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGNPAPRLKICDFGFSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKSIGRIMSVQYAIPDYVRVSKECRHLISSIFVANPAKRITMSEIKQHLWFRKNLPREIIEAERRGYEETQKDQPSQSVEEIMQIIEEARTKIHTREQTSTGSSNVVHVDEANEEVDDHFAKNLVLE* | 339 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra11g0425 | 338 | SUPERFAMILY | Protein kinase-like (PK-like) | 4 | 289 | IPR011009 | - | |
Vra11g0425 | 338 | PANTHER | SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE | 4 | 332 | - | - | |
Vra11g0425 | 338 | MobiDBLite | consensus disorder prediction | 304 | 323 | - | - | |
Vra11g0425 | 338 | Pfam | Protein kinase domain | 6 | 262 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra11g0425 | 338 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 121 | 133 | IPR008271 | GO:0004672|GO:0006468 | |
Vra11g0425 | 338 | Gene3D | Transferase(Phosphotransferase) domain 1 | 82 | 270 | - | - | |
Vra11g0425 | 338 | ProSiteProfiles | Protein kinase domain profile. | 6 | 262 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra11g0425 | 338 | CDD | STKc_SnRK2 | 5 | 261 | - | - | |
Vra11g0425 | 338 | SMART | serkin_6 | 6 | 262 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra11g0425 | 338 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 81 | - | - | |
Vra11g0425 | 338 | PANTHER | SERINE/THREONINE KINASE | 4 | 332 | - | - | |
Vra11g0425 | 338 | ProSitePatterns | Protein kinases ATP-binding region signature. | 12 | 35 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra11g0425 | Vra-Chr11 | 3081845 | 3085141 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra11g0425 | 5 | 274 | CBL-interacting serine-threonine protein kinases | AT4G24400 | 43.416 | 1.20e-69 | 221 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_OST1L | Vra11g0425 | Pkinase | 9.5e-74 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra11g0425 | K14498 | - | gmx:547797 | 635.565 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vra11g0425 | 11 | 3081845 | 3085141 | Vra11g0425 | 11 | 3081845 | 3085141 | ECH | |
Vra11g0425 | 11 | 3081845 | 3085141 | Vra7g1325 | 7 | 30145375 | 30149634 | PCT |