Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0407 ATGTGCCGGCAGAATTCTCTTGCGCACCATTCTGGTGAAGAAGAAATTGCAGCTGACGAGAGCCTTTTGGTTTATTGCAAGCCTGTTGAACTGTACAATATTCTCTACCGCCGTGGTCTTCAAAATCCTTCGTTTCTTAGCAGATGTTTGCGTTATAAAATTACAGCAAGGCAGAAAAGGAGGTTGAGAGCAGGAATAGTGATTTTCAATTATAGGGACCACTACAACATGCTTCGAAAGACAGAAGTGACTGAAGACTTTTCTTGCCCATTTTGCTTGATGCAGTGTGGAAGCTTTAAGGGTTTGCGACTTCATCTATGTTCATCACATGATCTGTTCAACTTTGAGTTCTGGGTTACTGAAGATTACCAAGCAGTGAACGTGTCAGTAAAAGTGGATATATTGAGATCAGAGAATGTCGCTGATGGAATAATTCCACAATTGCAAACCTTCTTCTTCTGTTCAAGGCCTCGAAAGCGTAGAAGAAAGGATTCTGTTCAAAATGAAAAGCGCAGCAATGTAAAATTCATGGAGTTGGATTCACCTGAAGACATACAGAATGGATTTATACTAAAGGATGATGGGGAGAATGTGTCTAGAACATCTCGTAATGAGAAGATACTGCTTAGTGGAAGAAATGATGGACGGAAATCTGGTCCTGATCATCCTGGCACCATGGACGACCTGGAGCATGTTGAATCCAGTTTCAACATTTCTGGTGTTTCGATTGCCATGCCTCAATCTTCTGGAGACCCTGAATGTAGTAAATCAGTATGTAAAAGTGATCCTGCTCTGCCTGTTAAATCAAAGAAACTAAGCATGGATCGATCGGACTCCAGAAACCGAATGCTTCTGCAGAAGAGACTGTTCTTTCACTCACATAGAGTCCAGCCTATGGCACCAGAACAAGTGTTGTCAGACCGTGATAGTGAAGATGAAGTTGACGATGACATTGCAGATCTTGAAGATAGAAGGATGCTTGATGATTTTGTGGATGTTTCCAAAGATGAAAAACAACTCATGCATCTCTGGAACTCCTTTATGAGGAAGCAAAGGGTGCTGGCAGATGGTCATGTGCCGTGGGCCTGTGAGGCATTTTCCAAGCTTCATGGAAAAGAGCTAGTCACATCTCCAACTTTATTCTGCAGGTGTTGGAGGTTATTCATGATTAAACTTTGGAATCATGGTCTTCTTGATGCCTGCACAATGAACAACTGTAACAGAACATTAGATAGTTACAGAAACGGGGGATTGGGTACTAGCAAATAA 1269 0.4192 MCRQNSLAHHSGEEEIAADESLLVYCKPVELYNILYRRGLQNPSFLSRCLRYKITARQKRRLRAGIVIFNYRDHYNMLRKTEVTEDFSCPFCLMQCGSFKGLRLHLCSSHDLFNFEFWVTEDYQAVNVSVKVDILRSENVADGIIPQLQTFFFCSRPRKRRRKDSVQNEKRSNVKFMELDSPEDIQNGFILKDDGENVSRTSRNEKILLSGRNDGRKSGPDHPGTMDDLEHVESSFNISGVSIAMPQSSGDPECSKSVCKSDPALPVKSKKLSMDRSDSRNRMLLQKRLFFHSHRVQPMAPEQVLSDRDSEDEVDDDIADLEDRRMLDDFVDVSKDEKQLMHLWNSFMRKQRVLADGHVPWACEAFSKLHGKELVTSPTLFCRCWRLFMIKLWNHGLLDACTMNNCNRTLDSYRNGGLGTSK* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0407 422 Pfam VEFS-Box of polycomb protein 272 408 IPR019135 -
Vra11g0407 422 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 1 62 - -
Vra11g0407 422 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 59 416 - -
Vra11g0407 422 MobiDBLite consensus disorder prediction 201 229 - -
Vra11g0407 422 PANTHER POLYCOMB GROUP PROTEIN 59 416 - -
Vra11g0407 422 PANTHER POLYCOMB GROUP PROTEIN 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0407 Vra-Chr11 2958389 2967712 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0407 1 68 C2H2 Transcription Factor Family AT5G51230 57.353 1.81e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0407 - - vra:106777944 836.254