Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0398 ATGGGTGGATTCATCACTCTCTTTCTCATCTGTGTTCTCATCTTGCAAAGCTCTGTTCTTGAGGTGACCCATGCAAGGTTCCAATCAACAAAGTGTGGAGATGCAGGTCCTGACATCCACTATCCATATCAGATAAAAGGTCAGCACCAGTACGATGAGTCCCTTCCTGGTTTTGAGCTTCTTTGCAAAGATAACCTCACCACCATCCACTTTCCATCTTATGGAGATTTAGAAGTGAAGTCTATCTCCTATGACACCAAAGACATTCACCTCCTTGACCCCAAAAATTGTGTGCATCATGTCTTTCTAAACCTCAATCTCTTCCTCACTCCCTTCCACTATTTTTATGTTCTGAAAAATTATACATACCTCAATTGCTCAACCACCCTTCTACCTCCTTTCGTGGAGATTCCATGTTTAAGTGCTGCTAGTTATCATGTCTACACAGTTGACCCTGCACTACCAGTGCCAGGTTCATGTGCAGGAGTTAAAACCGTTGCCATTCCTTTTGCATATAGCCCTTATCTCTCGGACAGTAAACTCGGTCTTAGATTAACATGGGGCATGCGTGAACCTCAAGACAGGGAAACAACAAACGGTGCTAGAGGTTCCCACACATCGCGTAACATAGGTATTGGGTTCGGCATGTTTGTTTTTGTGATGGCAATGTTATTGCTTATAAGCACAAAGATTCGTGTTGCCGCGAGGAATAACCATCAGAAAGAAGGGCAGTTATTGTATAGTTAG 747 0.4324 MGGFITLFLICVLILQSSVLEVTHARFQSTKCGDAGPDIHYPYQIKGQHQYDESLPGFELLCKDNLTTIHFPSYGDLEVKSISYDTKDIHLLDPKNCVHHVFLNLNLFLTPFHYFYVLKNYTYLNCSTTLLPPFVEIPCLSAASYHVYTVDPALPVPGSCAGVKTVAIPFAYSPYLSDSKLGLRLTWGMREPQDRETTNGARGSHTSRNIGIGFGMFVFVMAMLLLISTKIRVAARNNHQKEGQLLYS* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0398 248 PANTHER PROTEIN, PUTATIVE-RELATED 3 242 - -
Vra11g0398 248 Pfam Wall-associated receptor kinase galacturonan-binding 31 93 IPR025287 GO:0030247
Vra11g0398 248 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 3 242 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0398 29 202 C3H Transcription Factor Family AT2G25410 28.261 6.33e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0398 - - gmx:100790327 384.415