Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0376 ATGAGTAGGGGAACTATAGAAGATGTGGCAATTATAGGAGGATTGGTTGGAGTCCAATTTATCTATGCAGGGAATGCTGTGTTCATGGGTTATGCATTATCATTAGGCTTCAGCTCTCTCACCATTATCATTTTGACTTCTTTGGCTACATTCCTTGTTCTGTTCCCCGTTTCATTTTTCTTTGAAAGGAGCAAGTGGCCGAAGAATTGTGATTTCAAGTTGATTAAACAGCTATTGTGTCTATCGTTTGGAGGACTGTTGTTCCAGTATTTATTCCTCAAGGGACTCGATCTAACTTCGCCGGCAATGGGAACTGCTATGCCAAACATTGCCCCAGGTCTTATCTTCATCATTGCATGGATTTCTGGGTTAGAGAAAGTGAACTTAAACAATCAGTATAGCAAAGTAAAAATCATGGGAACAGTGCTTTGTGTCTTGGGAGCTCTCACAATGAGCATAATGCAAAGCATTTCGACTGCTGCACCCGAGCAAAATTCAACACTTCCATTATCAAAGACTCCATCAGGTTTTGTCTTTAACACACAAAAGATGATCGGTTGCTTCTATCTCGTGGTTGCAGTCGTGATTTTGTCGAGCAACGTCGTTCTGCAGGCTTTTACTCTTGGAGATTTTCCGGCACCGATGTCCTTGGGTGCAATAACGTCCTTGTTGAGCGCATTCATGACTGCAACCATTCAGGTGCTTGAGAAACACAGGCTGAAAACTGGGCGGCTACTTCTGAGGTCTGGAAATTTAATTGGCTATTTTATTATGGCAGGTGCTGTGAGTGGAATATGCCTGAGTTTCAACGGGTGGGCACTGAAGAAAAAAGGGCCAGTTTTTGTCTCCATGTTCAGCCCCATTGGTACAGTTTGCTCTGTCATTTTCGCGGTTATTAAACTTGGAGAAAGTATGAGTACTGGAAGTCTTGGAGGCATGTTTCTCATGTTCACTGGACTCTACTTGGTTCTCTGGGCCAAAGGGGAAGAAGGACTGCCAAATGGAAATAGCTTAGAGAGTGAGTTTGACATAGAGAGGCCTCTTTTGTGTTAA 1053 0.4311 MSRGTIEDVAIIGGLVGVQFIYAGNAVFMGYALSLGFSSLTIIILTSLATFLVLFPVSFFFERSKWPKNCDFKLIKQLLCLSFGGLLFQYLFLKGLDLTSPAMGTAMPNIAPGLIFIIAWISGLEKVNLNNQYSKVKIMGTVLCVLGALTMSIMQSISTAAPEQNSTLPLSKTPSGFVFNTQKMIGCFYLVVAVVILSSNVVLQAFTLGDFPAPMSLGAITSLLSAFMTATIQVLEKHRLKTGRLLLRSGNLIGYFIMAGAVSGICLSFNGWALKKKGPVFVSMFSPIGTVCSVIFAVIKLGESMSTGSLGGMFLMFTGLYLVLWAKGEEGLPNGNSLESEFDIERPLLC* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0376 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 153 - -
Vra11g0376 350 Pfam EamA-like transporter family 17 152 IPR000620 GO:0016020|GO:0016021
Vra11g0376 350 Pfam EamA-like transporter family 184 324 IPR000620 GO:0016020|GO:0016021
Vra11g0376 350 PANTHER WAT1-RELATED PROTEIN 10 341 IPR030184 GO:0016021|GO:0022857
Vra11g0376 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 328 - -
Vra11g0376 350 PANTHER WAT1-RELATED PROTEIN 10 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0376 Vra-Chr11 2742564 2744802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0376 1 341 Nodulin-like Gene Family AT5G47470 56.268 1.82e-131 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0376 - - gmx:100784734 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0376 11 2742564 2744802 Vra7g1375 7 30850196 30853187 PCT