Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0367 ATGGTGTCACTGCAAGTAGTGTTCGTGGTTTTCACCTTTATACTCCATGCAACAACAGTGACGTCTACACCCCACCATGACCTTATCTTCAAGACATTCTCTTCAGCCAACTTTTCCAAGAACCAGCCCTGGGTCGGACCCATCGGCCACCGTCAAATCACGGTTGACATTAATGGCGGTGGCCACTACCGGTCCGTTCAAGACGCCGTCGATGCCGTCCCAGACAACAACAGAAGGAATATCTTCATTAAAATCAACGCCGGATGCTACAAAGAAAAGGTGGTGGTGCCCGTGACGAAGCCGTACATAACTTTTGAGGGTGCAGGTAGAGAAGTGACGGTGATAGAATGGCATGATCGAGCCAGTGACCCTGGTCCCAGTGGACAGCAGCTTCGTACTTACAGAACCGCTTCTGTTACTGTTTTTGCCAGTTATTTTTCTGCCAGAAACATCAGCTTCAAGAACACAGCGCCTGCACCATTGCCGGGGATGCAGGGATGGCAAGCGGTGGCGTTTCGCATATCCGGCGATAAGGCATACTTCTCCGGCTGCGGGTTCTACGGCGCACAAGACACACTTTGTGACGATGCTGGCAGACATTACTTCAAGGAATGCTACATTGAAGGATCCATCGATTTCATTTTTGGCAATGGCAGGTCCATGTACAAGGATTGCTGGCTGCACTCAATAGCAAGCAGGTTTGGGTCGATAGCGGCCCAGGACAGGAAGCAGGAGGAGGAGAAGACAGGGTTCGCATTCGTAGGATGCAGGGTGACAGGTACAGGTCCACTCTATGTGGGACGAGCAATGGGACAGTATTCTAGAATCGTCTACTCCTACACATATTTCGATGACATTGTTGCACATGGTGGTTGGGATGATTGGGACCATGCAGACAATAAGAACAAGACTGTGTTCTTCGGAGTGTACAAGTGTTGGGGACCAGGAGCAGAGGCTGTTCGTGGGGTTTCACTGGCCCGAGACTTGGATTTTGAAACGGCTCATCCATTTATCAGGAAGAGTTTCGTCAATGGCAGACACTGGATTGCACCATCTGATGCTTAG 1065 0.5033 MVSLQVVFVVFTFILHATTVTSTPHHDLIFKTFSSANFSKNQPWVGPIGHRQITVDINGGGHYRSVQDAVDAVPDNNRRNIFIKINAGCYKEKVVVPVTKPYITFEGAGREVTVIEWHDRASDPGPSGQQLRTYRTASVTVFASYFSARNISFKNTAPAPLPGMQGWQAVAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCWLHSIASRFGSIAAQDRKQEEEKTGFAFVGCRVTGTGPLYVGRAMGQYSRIVYSYTYFDDIVAHGGWDDWDHADNKNKTVFFGVYKCWGPGAEAVRGVSLARDLDFETAHPFIRKSFVNGRHWIAPSDA* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0367 354 PANTHER PECTINESTERASE 68-RELATED 10 353 - -
Vra11g0367 354 SUPERFAMILY Pectin lyase-like 50 351 IPR011050 -
Vra11g0367 354 Gene3D - 49 353 IPR012334 -
Vra11g0367 354 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 10 353 - -
Vra11g0367 354 ProSitePatterns Pectinesterase signature 2. 207 216 IPR033131 -
Vra11g0367 354 Pfam Pectinesterase 53 345 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0367 Vra-Chr11 2685805 2689223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0367 41 354 Carbohydrate Esterase AT5G47500 81.210 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0367 - - gmx:100816190 660.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0367 11 2685805 2689223 Vra11g0367 11 2685805 2689223 ECH