Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0354 ATGTCGGCTTACAAAGACCAGGATCCTCGTCTTCATGGCATCAAAACTAAGATTCGTGTCGTCCCAAATTTCCCCAAATCCGGTATTATGTTCCAAGACATTACTACTCTATTGCTCGATCCCAAGGCATTTAAGGACACGATCGATTTGTTCGTCGAGCGATACAAGGGCAAAAACATTTCTGTTGTTGCAGGAATCGAAGCTCGAGGTTTTATTTTTGGTCCTCCCATTGCACTGGCTATAGGAGCAAAGTTCGTTCCTTTGAGGAAACCAAAGAAGTTGCCTGGAAAAGTTATTTCTCAAGAGTATATTCTGGAATATGGAAGGGACTGTATTGAGATGCATGTTGGAGCTGTTGAATCTGGTGAACGTGCTTTAGTGGTTGATGATTTGATTGCAACGGGAGGAACACTCTGTGCAGCTATGGATTTGCTAGAACGTGTGGGAGCAGAAGTAGTGGAGTGTGCATGCGTAATTGAATTACCGGAAATGAAGGGTCGTGAGCGATTGAACGGGAAGCCATTGTACGTGTTGGTGGAATATAAGGAGAAATGA 555 0.4378 MSAYKDQDPRLHGIKTKIRVVPNFPKSGIMFQDITTLLLDPKAFKDTIDLFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISQEYILEYGRDCIEMHVGAVESGERALVVDDLIATGGTLCAAMDLLERVGAEVVECACVIELPEMKGRERLNGKPLYVLVEYKEK* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0354 184 CDD PRTases_typeI 48 180 IPR000836 -
Vra11g0354 184 Pfam Phosphoribosyl transferase domain 50 165 IPR000836 -
Vra11g0354 184 TIGRFAM apt: adenine phosphoribosyltransferase 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
Vra11g0354 184 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 3-RELATED 2 181 - -
Vra11g0354 184 Hamap Adenine phosphoribosyltransferase [apt]. 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
Vra11g0354 184 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 2 181 - -
Vra11g0354 184 SUPERFAMILY PRTase-like 12 176 IPR029057 -
Vra11g0354 184 Gene3D - 2 183 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0354 Vra-Chr11 2543924 2550680 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0354 1 180 PRT Gene Family AT1G27450 75.000 6.08e-97 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0354 K00759 - gmx:100306411 356.295