Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0351 ATGGCTGAGTTCAACTCAGTTCCTCATTGGCTTCTCATTCTCAAGGAGGAGAAGTTTTTCAGTCGCTGTTTGAGTCATGGCTCTGTAAAGAAGAATGAGAAGAACGTCTTTTGTTTAGATTGCTGCACGAGCATTTGCCTCCACTGTTTGCCCTTTCATCGCTCTCACGTCCTTCTGCAGATACGGAGATACATGTACAATGATGTATTACGGCTTGGTGATGCTGAAACAGTGTTGAATTGTTCCCTTGTTCAACCGTACACAACAAATAAAACCAAGGTTGTCTTTCTGAAACAGAGGCCTCACACTCGTTCTCACAAAGGCTCTAGCAACATTTGCATCACCTGTGACCGTAACCTTCAAGACCCTTACATCTTCTGCTCTCTGTCTTGCAAGGTGCATCGACATCTTCTACTTATTACCAAAAGCACAACCATGGAAGGAACTTGGAACAAGTATGAACTCTCTGTGCTACTTGACAAAGAACGAAGCAGGGAGAACGCACAACAGATTGAAGACAGCCAAATCACAACAGATTCAGAACTAGACTCACCCACAGCTTCTGGGTCAACGAGTAGTATCGGTGAGGGTGGTGTGGCAGAGACTGTGAATAATTCACTCAAAAAGAAACGTGGCAATGTTGAAATGGTGCCGGAGATCTGGTACACTGTGGTGAACCGGCGAAAAGGTGTTCCTCATCGATCTCCACTGTACTAA 717 0.4491 MAEFNSVPHWLLILKEEKFFSRCLSHGSVKKNEKNVFCLDCCTSICLHCLPFHRSHVLLQIRRYMYNDVLRLGDAETVLNCSLVQPYTTNKTKVVFLKQRPHTRSHKGSSNICITCDRNLQDPYIFCSLSCKVHRHLLLITKSTTMEGTWNKYELSVLLDKERSRENAQQIEDSQITTDSELDSPTASGSTSSIGEGGVAETVNNSLKKKRGNVEMVPEIWYTVVNRRKGVPHRSPLY* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0351 238 MobiDBLite consensus disorder prediction 170 200 - -
Vra11g0351 238 ProSiteProfiles Zinc finger B-box type profile. 18 61 IPR000315 GO:0008270
Vra11g0351 238 PANTHER BNAA09G38660D PROTEIN 6 238 - -
Vra11g0351 238 MobiDBLite consensus disorder prediction 168 208 - -
Vra11g0351 238 Pfam PLATZ transcription factor 62 133 IPR006734 -
Vra11g0351 238 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 6 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0351 Vra-Chr11 2526741 2528018 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vra11g0351 PLATZ 1.3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0351 - - vun:114173273 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0351 11 2526741 2528018 Vra11g0351 11 2526741 2528018 ECH