Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0328 ATGGAGAAAAGCAAGTACGTGATGGAGCTTGCGTTTCTTCTGGGTCTCATTTTCATGCTTGGCACCAATGCAACTTCATCTGCCAAAGACCATGGGAACAACTTGCAAACTTACATTGTTCACGTTAAAAGGGTAGAAAGTAGACCTACTCTTGAATCAGAAGAGTTGCATAACTGGTACCACTCCTTCCTTCCAGAAACCTCCAAGAAGGATCGAATGGTTTTCTCTTACCGCAATGTGGCCTCTGGATTTGCCGTGAAGTTAACCCCAGAAGAAGCCAAGGCTCTTCTAGAGAAAGATGAGATTGTGTCAGCTCGTCCTGAAAGGACACTTTCTCTGCACACAACACACACTCCATCATTCTTGGGGCTGCGACAAGGAGGAGGATTGTGGAATAGTTCCAACCTTGGCCAAGGCGTCATAATTGGAGTCATAGACACGGGTATATACCCTTTCCATCCGTCATTCAACGATGAAGGGATGCCACCTCCACCGTCCAAATGGAACGGACACTGTGAATTCACAGGGCAAAGAACCTGCAACAATAAACTAATTGGTGCAAGGAACTTGCTCAAAAGCGCTGCTGAAGAGCCTCCTTTTGAAAACTTCTTCCACGGAACTCACACTTCTGCGGAAGCTGCTGGAAGATTTGTAGAGAACGCTAGTGTTTTTGGCAACGCTCGGGGAACTGCGGCTGGCATGGCGCCTAATGCTCACTTAGCTATGTACAAAGTTTGCAATGATCAAGTAGGATGCACTGAAAGTGCCATCTTAGCCGCAATGGACATAGCCATTGATGATGGTGTTGATGTTCTTTCTCTCTCCCTTGGATTAGGCTCTCTTCCATTCTTTGAAGACCCTATTGCCATCGGTGCATTTGCGGCTATTCAGAACGGAGTTTTTGTTAGTTGCTCAGCCGCAAACTCTGGCCCTGAATATGCCACTCTCTCCAACGAAGCCCCGTGGATCCTCACCGTTGGTGCAAGCACTATTGACAGAAAGATAGCAGCATCGGCAGTACTTGGAAATGGTGCAGAATATACAGGGGAATCTTTGTTCCAACCCCAAGATTTTTCCCCTACACTGTTGCCACTTGTGTATCCTGGTGCAAACGGGAACCTCAGCTCCGGCTTCTGTTTACCTGATTCCTTAGACGACGTCGATGTGGAGGGAAAAGTGGTGGTCTGCGACATAGGTGGAGGATTGTCAAGTGTAGTCAAAGCACAAGTAGTCCTGGACGCCGGTGGCGCAGCCATGATTCTCGCCAACCCAGAAAGTTTGGGCTTCAGTACTTTCGCTACTGCTTATGTTTTGCCTGCAGTCGAAGTTAGTTACCTTGCTGGGTTGGCCATAAAGTCTTACATAAACTCAACTAGCTCACCAAATGCAACAATCTCGTTCCAAGGAACCGTGATTGGTGATGCACTTGCTCCCGCAGTTGTTTCATTTTCTTCAAGGGGTCCAAGCCAGGCTAGTCCTGGGATTCTGAAACCCGACATTATTGGACCAGGAGTGAACATTTTAGCTGCATGGGGTATCTCTGTAGACAACAAATTCCCACCATACGATATTGTTTCAGGAACATCAATGTCTTGTCCTCACCTTAGTGGTATTGCTGCATTGCTCAAAAGTGCACACCCTGATTGGTCCCCTGCGGCTATCAAATCAGCAATTATGACCACTGCCCACACACTCAACCTCGGAGGAAAACCCATATTGGACCAGAGGCTTCTTCCTGCTGACATATTTGCCACCGGTGCAGGCCATGTTAACCCTAACAAAGCGAATGATCCGGGGCTTGTTTATGATATCCAGCCAGATGATTACATTCCCTATTTGTGTGGCTTAGGTTATGATGATAGAGAAATAGGAATTATTGTGCAAAAGAGAGTGAGATGCAGCGGCGTAACAGTCATACCAGAAGCACAACTGAACTACCCTTCGTTTTCTATTGTGCTGGGGTCGACTACACAGGACTACACCAGAACATTGACGAACGTTGGACCTGCAGAGGCAACTTACGTGGTGGATCTTGAAGTTCCTCTGGCGACGGGGATGAGCGTGAACCCTAGTGAGATAACATTCACGCAGGTGAAGCAGAAGGTTACATTCTCTGTGGAGTTTATCCCAGAGGAAAAGGAAAATAGGGGCAACCATAGTTTTGCTCAGGGCTCTCTTACCTGGATCAGGGTGTCTGACAAACACACCGTTAGAATCCCCATATCGGTTATTTTCGAGTGA 2241 0.4734 MEKSKYVMELAFLLGLIFMLGTNATSSAKDHGNNLQTYIVHVKRVESRPTLESEELHNWYHSFLPETSKKDRMVFSYRNVASGFAVKLTPEEAKALLEKDEIVSARPERTLSLHTTHTPSFLGLRQGGGLWNSSNLGQGVIIGVIDTGIYPFHPSFNDEGMPPPPSKWNGHCEFTGQRTCNNKLIGARNLLKSAAEEPPFENFFHGTHTSAEAAGRFVENASVFGNARGTAAGMAPNAHLAMYKVCNDQVGCTESAILAAMDIAIDDGVDVLSLSLGLGSLPFFEDPIAIGAFAAIQNGVFVSCSAANSGPEYATLSNEAPWILTVGASTIDRKIAASAVLGNGAEYTGESLFQPQDFSPTLLPLVYPGANGNLSSGFCLPDSLDDVDVEGKVVVCDIGGGLSSVVKAQVVLDAGGAAMILANPESLGFSTFATAYVLPAVEVSYLAGLAIKSYINSTSSPNATISFQGTVIGDALAPAVVSFSSRGPSQASPGILKPDIIGPGVNILAAWGISVDNKFPPYDIVSGTSMSCPHLSGIAALLKSAHPDWSPAAIKSAIMTTAHTLNLGGKPILDQRLLPADIFATGAGHVNPNKANDPGLVYDIQPDDYIPYLCGLGYDDREIGIIVQKRVRCSGVTVIPEAQLNYPSFSIVLGSTTQDYTRTLTNVGPAEATYVVDLEVPLATGMSVNPSEITFTQVKQKVTFSVEFIPEEKENRGNHSFAQGSLTWIRVSDKHTVRIPISVIFE* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0328 746 CDD PA_subtilisin_like 340 465 - -
Vra11g0328 746 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 23 745 - -
Vra11g0328 746 ProSiteProfiles Serine proteases, subtilase domain profile. 121 596 - -
Vra11g0328 746 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Vra11g0328 746 PRINTS Subtilisin serine protease family (S8) signature 201 214 IPR015500 -
Vra11g0328 746 PRINTS Subtilisin serine protease family (S8) signature 526 542 IPR015500 -
Vra11g0328 746 SUPERFAMILY Subtilisin-like 113 600 IPR036852 GO:0004252|GO:0006508
Vra11g0328 746 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 114 IPR037045 -
Vra11g0328 746 CDD Peptidases_S8_3 113 563 IPR034197 -
Vra11g0328 746 Gene3D - 613 744 - -
Vra11g0328 746 Gene3D Peptidase S8/S53 domain 139 609 IPR036852 GO:0004252|GO:0006508
Vra11g0328 746 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 745 IPR045051 -
Vra11g0328 746 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 142 153 IPR023827 -
Vra11g0328 746 Pfam PA domain 364 451 IPR003137 -
Vra11g0328 746 Pfam Fibronectin type-III domain 643 743 IPR041469 -
Vra11g0328 746 Pfam Peptidase inhibitor I9 37 114 IPR010259 -
Vra11g0328 746 Pfam Subtilase family 137 569 IPR000209 GO:0006508|GO:0008236
Vra11g0328 746 Gene3D - 332 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0328 Vra-Chr11 2357566 2359811 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0328 12 746 Subtilisin-like Serine Gene Family AT1G04110 43.846 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0328 - - gmx:100783595 1286.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0328 11 2357566 2359811 Vra11g0328 11 2357566 2359811 ECH