Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0308 ATGTGGCCTCTTTGTCTTGGAGCATTGCTTATTATAGCCATTACACATTGGGTTTATAGATGGAGAAATCCCAGTTGCCATGGGAAACTCCCCCCAGGTTCAATGGGTTTCCCCCTTCTCGGTGAGACCCTTCAGTTTTTCTCCCCCAACACCTCTTCTGATATTCCTCCTTTCATCAAAAAGAGAATGAAAAGGTATGGACCAATCTTCAAGACCAACTTGGTTGGACGCCCAGTTGTAGTTTCAACAGACCCTGACCTTAATTACTTTATCTTCCAACAAGAGGGTCAGGTGTTTCAAAGCTGGTACCCAGACACATTCACTGAGATCTTTGGGCGACAAAATGTTGGTTCCTTACATGGGTTCATGTACAAGTACCTCAAGAATTTGGTGCTCAATCTGTTTGGTCCTGAAAGCCTTAAAAAGATGCTCCCAGAAGTCGAACAAACAGCCTGCAGAACATTAGAGAAGTGGTCATGCGAGGACAGTGTTGATCTCAAGGAAGCAACAGCAAGGATGATATTTGATTTGACCGCAAAAAAACTCATCAGTTATGATTCAACCAAATCCTCGGAGAACTTAAGGGACAACTTTGTTGCATTTATACAAGGACTCATCTCCTTCCCTCTGGACGTTCCAGGAACAGCTTATCACAAATGTCTACAGGGTAGGAAAAGGGCAATGAAGATGCTGAAGAAGATGCTGCAGGAAAGACGGGAAATGCAAAAGAAAGAGCAAGAAGATTTCTTTGACTATGTGATTGAAGAACTTAAGAAAGAGGGAACAGTCCTGACTGAAGCGATCGCTCTGGACCTCATGTTTGTGCTCCTCTTTGCAAGCTTTGAAACCACTTCTCTCGCTCTTACTTACGCCACCAAAGTACTCTCGGACCATCCCTTAGTACTCAAGCAATTACAAGAGGAACATGAAGCCATCCTGAAGCGACGTGAAGATCCTAACTCCGGAATCACGTGGAAAGAATACAAATCAATGACATATACATTTCAGTTCATAAATGAAACCGTGAGACTCGCAAATATAGTTCCTGGAATCTTCCGGAAGGCACTGAGGGAAATTAACTTTAAGGGTACGTATGTCATATGTTTATTTCATTCATTCATTCATTCATTTCACATTACCAAAGACAGTTTTTGA 1155 0.4242 MWPLCLGALLIIAITHWVYRWRNPSCHGKLPPGSMGFPLLGETLQFFSPNTSSDIPPFIKKRMKRYGPIFKTNLVGRPVVVSTDPDLNYFIFQQEGQVFQSWYPDTFTEIFGRQNVGSLHGFMYKYLKNLVLNLFGPESLKKMLPEVEQTACRTLEKWSCEDSVDLKEATARMIFDLTAKKLISYDSTKSSENLRDNFVAFIQGLISFPLDVPGTAYHKCLQGRKRAMKMLKKMLQERREMQKKEQEDFFDYVIEELKKEGTVLTEAIALDLMFVLLFASFETTSLALTYATKVLSDHPLVLKQLQEEHEAILKRREDPNSGITWKEYKSMTYTFQFINETVRLANIVPGIFRKALREINFKGTYVICLFHSFIHSFHITKDSF* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0308 384 SUPERFAMILY Cytochrome P450 28 366 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0308 384 Pfam Cytochrome P450 31 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0308 384 PANTHER CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 2 8 364 - -
Vra11g0308 384 Coils Coil 224 247 - -
Vra11g0308 384 PANTHER CYTOCHROME P450 26 8 364 - -
Vra11g0308 384 Gene3D Cytochrome P450 22 375 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0308 384 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0308 384 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0308 384 PRINTS E-class P450 group I signature 288 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0308 384 PRINTS E-class P450 group I signature 335 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0308 Vra-Chr11 2177290 2201422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0308 1 362 Cytochrome P450 AT1G12740 77.135 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0308 - - gmx:100812089 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0308 11 2177290 2201422 Vra11g0308 11 2177290 2201422 ECH