Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0291 ATGGTTAGTAACGAGGGCAACGAGAAGGAGAAAGACCTTGAGTTTTCGTTTGAAGATGTTATAAACGACGTCGCACAAAATGATATTGAAACAGCTAAGTTAGAGAGTGAGAGCAGTAGCAGTGATGACGAGGAAATTCATCAAACACATTCTCACTCTTTCACTTCTCTTCAATGGCCCCAAAGTTACAAAGAGACTACAGATTCTTATACACTTGCAGCAACTCCACATTTTGAATCAATTCTACGAGTACCAAGTATTATATTGTCCAGTTTTGAAAGTCGTTCAAAGCAGAACTCGCAAATAGATGGAAAGACTCCTTTCCTCTCTAGTCCTGAAGTCACTACCCAATCACCATTGTTGAAGGAAGATGCAGCACAAGGGCATTCAGTAGGCGAATTGCCCGTTAGTCGTGGGTGCAGCTTAATTCAAACAATTTTCAATGCAACTAATGTGATGGCTGGAGTTGGCATTCTCTCAACACCTTATACAATGAAAGAAGCTGGTTGGGTTAGCATGGTGTTGATGGTTCTTTTCGCTGTCATTTGCTTCTATACAGCCACCCTTATGAGATACTGCTTTGAAAGCAGAGAAGGAATCAATAGCTACCCAGATATAGGAGAAGCTGCATTTGGAAAATATGGTCGTATTATCGTATCAATCATCTTGTACACGGAATTATATTCATGTTGTGTAGAATTTGTCACCTTGGAAGGAGACAATCTCAGTGGACTATTTCCCGGAACATTCTTAGATTTGGGTGGTTTGCATTTAGATTCTGTGCACTTGTTTGGAATATTTGCTGCACTTATTTTTATCCCAACTGTTTTGCTGAAGGATCTTCGTATAATCTCTGTACTGTCAGCTGGAGGAGTTTTTGCAACACTGTTGATTGTTATCTGTGTGTTTTGTGTTGGGATGATGGATAGTATTGGATTCCATCACAGCACAGAATTCGTCAAGTGGAGTGGCATTCCATTAGCTATTGGTATCCACGGGTTTTGCTTTGCAGGCCATTCAGTTTTTCCTAATATTTACCAATCTATGGCTGACAAAACACAATTTACCAAAGCATTACTTGTATGTTTTGCATTGTCTGTTGCAATATATGGAGGTGTTGCTATCATGGGATTCCTTGAATTTGGCAACGACACTTTGTCTCAAATAACATTAAATTTGCCACGAAATGCATTTGCTTCCCAGGTTGCAATGTGGACAACAGTAATTAACCCATTCACCAAATATGCTTTATTGATGACCCCATTAGCAAGAAGTCTGGAGGAGCTGCTACCAGATAGATACTCAAGTAGTAATCGGTGTTTCGTTCTTATTAGAGTTGCACTTGTTGTATCTACAGTTTGTGCTGCTTTTCTGATTCCCTTTTTCGGGTATGTAATGGCTTTAATTGGCTCTCTCTTCAGTATACTTGTGTCAGTGATATTTCCAAGTTTATGCTTTATGAGAATTGTGGGGAAAAAAGCATCGAATACACAGGTTGCGCTGAGCGTGGTAATTACTGCATTTGGAGTCATTTTTGGAGTTCTAGGAACATATTCATCTGTGCTGAATATTGTGAACAGTTACTGA 1587 0.3951 MVSNEGNEKEKDLEFSFEDVINDVAQNDIETAKLESESSSSDDEEIHQTHSHSFTSLQWPQSYKETTDSYTLAATPHFESILRVPSIILSSFESRSKQNSQIDGKTPFLSSPEVTTQSPLLKEDAAQGHSVGELPVSRGCSLIQTIFNATNVMAGVGILSTPYTMKEAGWVSMVLMVLFAVICFYTATLMRYCFESREGINSYPDIGEAAFGKYGRIIVSIILYTELYSCCVEFVTLEGDNLSGLFPGTFLDLGGLHLDSVHLFGIFAALIFIPTVLLKDLRIISVLSAGGVFATLLIVICVFCVGMMDSIGFHHSTEFVKWSGIPLAIGIHGFCFAGHSVFPNIYQSMADKTQFTKALLVCFALSVAIYGGVAIMGFLEFGNDTLSQITLNLPRNAFASQVAMWTTVINPFTKYALLMTPLARSLEELLPDRYSSSNRCFVLIRVALVVSTVCAAFLIPFFGYVMALIGSLFSILVSVIFPSLCFMRIVGKKASNTQVALSVVITAFGVIFGVLGTYSSVLNIVNSY* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0291 528 MobiDBLite consensus disorder prediction 35 50 - -
Vra11g0291 528 Pfam Transmembrane amino acid transporter protein 140 520 IPR013057 -
Vra11g0291 528 PANTHER OS05G0424000 PROTEIN-RELATED 34 526 - -
Vra11g0291 528 PANTHER AMINO ACID TRANSPORTER AVT1A 34 526 - -
Vra11g0291 528 MobiDBLite consensus disorder prediction 28 55 - -
Vra11g0291 528 Gene3D Amino acid/polyamine transporter I 137 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0291 Vra-Chr11 2062233 2066731 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0291 2 468 Amino Acid or Auxin Permease AAAP Family AT2G41190 58.385 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0291 K15015 - gmx:100816368 832.787